STRINGSTRING
STY2506 STY2506 STY2507 STY2507 STY2508 STY2508 nrdH nrdH nrdI nrdI STY2932 STY2932 STY2933 STY2933
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY2506Ribonucleoside-diphosphate reductase 1 alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (761 aa)
STY2507Similar to Salmonella typhimurium ribonucleoside-diphosphate reductase 1 beta chain nrdB SW:RIR2_SALTY (P37427) (375 aa) fasta scores: E(): 0, 99.7% id in 375 aa; Orthologue of E. coli nrdB (RIR2_ECOLI); Fasta hit to RIR2_ECOLI (375 aa), 98% identity in 375 aa overlap. (376 aa)
STY2508Putative ferredoxin; Similar to Neisseria meningitidis (serogroup A and B) putative iron-sulphur binding protein NMA1497 or NMB1287 TR:Q9JQU8 (EMBL:AL162756) (96 aa) fasta scores: E(): 5.7e-11, 50.0% id in 66 aa. Similar to the N-termini of some oxidoreductases e.g. Yersinia pseudotuberculosis CDP-6-deoxy-delta-3,4-glucoseen reductase ascD or rfbI SW:ASCD_YERPS (P37911) (328 aa) fasta scores: E(): 5.8e-07, 38.4% id in 86 aa. Also similar to plant ferredoxins e.g. Phytolacca esculenta ferredoxin i SW:FER1_PHYES (P00230) (96 aa) fasta scores: E(): 3.7e-05, 38.6% id in 88 aa; Orthologue o [...] (84 aa)
nrdHPutative glutaredoxin; Similar to Salmonella typhimurium LT2 glutaredoxin-like protein NrdH nrdH SW:NRDH_SALTY (Q56108) (81 aa) fasta scores: E(): 5.3e-32, 98.8% id in 81 aa; Orthologue of E. coli NRDH_ECOLI; Fasta hit to NRDH_ECOLI (81 aa), 84% identity in 81 aa overlap. (81 aa)
nrdINrdI protein; Probably involved in ribonucleotide reductase function. (136 aa)
STY2932Ribonucleoside-diphosphate reductase 2 alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (714 aa)
STY2933Ribonucleoside-diphosphate reductase 2 beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (319 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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