Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY1815 | STY3510 | gene:17585747 | gene:17587360 | NADP-specific glutamate dehydrogenase; Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia. | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 0, 95.4% id in 1486 aa and to Pseudomonas aeruginosa glutamate synthase large subunit GltB TR:P95456 (EMBL:U81261) (1482 aa) fasta scores: E(): 0, 60.9% id in 1476 aa. | 0.998 |
| STY3510 | STY1815 | gene:17587360 | gene:17585747 | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 0, 95.4% id in 1486 aa and to Pseudomonas aeruginosa glutamate synthase large subunit GltB TR:P95456 (EMBL:U81261) (1482 aa) fasta scores: E(): 0, 60.9% id in 1476 aa. | NADP-specific glutamate dehydrogenase; Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia. | 0.998 |
| STY3510 | gdhA | gene:17587360 | gene:17585843 | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 0, 95.4% id in 1486 aa and to Pseudomonas aeruginosa glutamate synthase large subunit GltB TR:P95456 (EMBL:U81261) (1482 aa) fasta scores: E(): 0, 60.9% id in 1476 aa. | Similar to Thermotoga maritima glutamate dehydrogenase gdha or gdh or tm1015 SW:DHE3_THEMA (P96110) (415 aa) fasta scores: E(): 0, 55.9% id in 388 aa, and to Clostridium difficile NAD-specific glutamate dehydrogenase gluD SW:DHE2_CLODI (P27346) (421 aa) fasta scores: E(): 0, 47.8% id in 391 aa; Paralogue of E. coli gdhA (DHE4_ECOLI); Fasta hit to DHE4_ECOLI (447 aa), 34% identity in 363 aa overlap; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.987 |
| gdhA | STY3510 | gene:17585843 | gene:17587360 | Similar to Thermotoga maritima glutamate dehydrogenase gdha or gdh or tm1015 SW:DHE3_THEMA (P96110) (415 aa) fasta scores: E(): 0, 55.9% id in 388 aa, and to Clostridium difficile NAD-specific glutamate dehydrogenase gluD SW:DHE2_CLODI (P27346) (421 aa) fasta scores: E(): 0, 47.8% id in 391 aa; Paralogue of E. coli gdhA (DHE4_ECOLI); Fasta hit to DHE4_ECOLI (447 aa), 34% identity in 363 aa overlap; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 0, 95.4% id in 1486 aa and to Pseudomonas aeruginosa glutamate synthase large subunit GltB TR:P95456 (EMBL:U81261) (1482 aa) fasta scores: E(): 0, 60.9% id in 1476 aa. | 0.987 |