Your Input: | |
| | sthB | Similar to Escherichia coli chaperone protein FimC SW:FIMC_ECOLI (P31697; P71220) (241 aa) fasta scores: E(): 6.3e-23, 32.6% id in 218 aa, and to Proteus mirabilis type 1 fimbrial chaperone AtfB TR:P72210 (EMBL:Z78535) (225 aa) fasta scores: E(): 7.1e-24, 33.0% id in 221 aa, and to Salmonella typhi FinC gene finC TR:Q56085 (EMBL:X74602) (237 aa) fasta scores: E(): 5.3e-23, 33.0% id in 215 aa. (227 aa) |
| | bcfB | Fimbrial chaperone; Similar to Salmonella typhimurium fimbrial chaperone BCFB TR:Q9X605 (EMBL:AF130422) fasta scores: E(): 0, 98.7% id in 228 aa, and to Salmonella typhimurium chaperone protein fimc precursor FIMC SW:FIMC_SALTY (P37923) fasta scores: E(): 0, 49.5% id in 220 aa; Fasta hit to YCBR_ECOLI (233 aa), 45% identity in 231 aa overlap; Fasta hit to YRAI_ECOLI (231 aa), 35% identity in 225 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 46% identity in 237 aa overlap; Fasta hit to YFCS_ECOLI (250 aa), 33% identity in 225 aa overlap; Fasta hit to YCBF_ECOLI (245 aa), 33% identity in [...] (228 aa) |
| | bcfG | Fimbrial chaperone; Similar to Salmonella typhimurium fimbrial chaperone BCFG TR:Q9X609 (EMBL:AF130422) fasta scores: E(): 0, 96.9% id in 229 aa, and to Escherichia coli hypothetical fimbrial chaperone in pepn-pyrd intergenic region precursor YCBF SW:YCBF_ECOLI (P40876; P75861) fasta scores: E(): 0, 41.9% id in 234 aa; Fasta hit to YCBR_ECOLI (233 aa), 33% identity in 223 aa overlap; Fasta hit to YRAI_ECOLI (231 aa), 32% identity in 216 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 33% identity in 226 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 36% identity in 223 aa overlap; Fasta h [...] (234 aa) |
| | STY0041 | Putative exported protein; Similar to Escherichia coli hypothetical 29.2 kda protein in xapa-lig intergenic region YFEN SW:YFEN_ECOLI (P45564) fasta scores: E(): 5.6e-20, 34.8% id in 244 aa; Paralogue of E. coli yfeN (YFEN_ECOLI); Fasta hit to YFEN_ECOLI (254 aa), 35% identity in 244 aa overlap. Contains possible N-terminal signal sequence and appropriately positioned PS00013 Prokaryotic membrane lipoprotein lipid attachment site. (253 aa) |
| | STY0107 | Survival protein SurA precursor; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (428 aa) |
| | STY0108 | Organic solvent tolerance protein precursor; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Belongs to the LptD family. (784 aa) |
| | STY0125 | Thiamine-binding periplasmic protein precursor; Orthologue of E. coli tbpA (TBPA_ECOLI); Fasta hit to TBPA_ECOLI (327 aa), 91% identity in 327 aa overlap. (327 aa) |
| | STY0191 | Glucose dehydrogenase; Orthologue of E. coli gcd (DHG_ECOLI); Fasta hit to DHG_ECOLI (796 aa), 93% identity in 796 aa overlap. (796 aa) |
| | staC | Outer membrane usher protein HtrE precursor; Fasta hit to YCBS_ECOLI (866 aa), 32% identity in 873 aa overlap; Fasta hit to YRAJ_ECOLI (838 aa), 34% identity in 841 aa overlap; Fasta hit to FIMD_ECOLI (878 aa), 33% identity in 881 aa overlap; Fasta hit to YEHB_ECOLI (826 aa), 32% identity in 833 aa overlap; Fasta hit to SFMD_ECOLI (867 aa), 31% identity in 866 aa overlap; Orthologue of E. coli htrE (HTRE_ECOLI); Fasta hit to HTRE_ECOLI (865 aa), 60% identity in 852 aa overlap. (863 aa) |
| | staB | Chaperone protein EcpD precursor; Fasta hit to YEHC_ECOLI (239 aa), 34% identity in 237 aa overlap; Fasta hit to YCBR_ECOLI (233 aa), 33% identity in 233 aa overlap; Fasta hit to YRAI_ECOLI (231 aa), 36% identity in 213 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 33% identity in 215 aa overlap; Fasta hit to YFCS_ECOLI (250 aa), 33% identity in 234 aa overlap; Fasta hit to YCBF_ECOLI (245 aa), 30% identity in 216 aa overlap; Fasta hit to SFMC_ECOLI (230 aa), 31% identity in 239 aa overlap; Fasta hit to YQIH_ECOLI (252 aa), 31% identity in 239 aa overlap; Fasta hit to YBGP_ECOLI (242 a [...] (244 aa) |
| | yaeT | Outer membrane protein precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery. (803 aa) |
| | STY0271 | RcsF protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family. (134 aa) |
| | STY0274 | Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (343 aa) |
| | safB | Similar to Escherichia coli chaperone protein AggD precursor SW:AGGD_ECOLI (P46004) (252 aa) fasta scores: E(): 0, 50.9% id in 216 aa, and to Escherichia coli chaperone protein AfaB precursor afaB SW:AFAB_ECOLI (P53516) (247 aa) fasta scores: E(): 0, 48.9% id in 227 aa; Fasta hit to YCBR_ECOLI (233 aa), 33% identity in 203 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 31% identity in 226 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 35% identity in 199 aa overlap; Fasta hit to SFMC_ECOLI (230 aa), 30% identity in 198 aa overlap; Paralogue of E. coli yraI (YRAI_ECOLI); Fasta hit to YRAI [...] (246 aa) |
| | safC | Similar to Escherichia coli aggregative adherence fimbria I usher protein AafC TR:Q9X4L5 (EMBL:AF114828) (856 aa) fasta scores: E(): 0, 49.9% id in 844 aa, and to Escherichia coli outer membrane usher protein AfaC precursor afaC SW:AFAC_ECOLI (P53517) (859 aa) fasta scores: E(): 0, 49.9% id in 849 aa; Fasta hit to YCBS_ECOLI (866 aa), 35% identity in 859 aa overlap; Fasta hit to YRAJ_ECOLI (838 aa), 36% identity in 843 aa overlap; Fasta hit to SFMD_ECOLI (867 aa), 35% identity in 846 aa overlap; Paralogue of E. coli fimD (FIMD_ECOLI); Fasta hit to FIMD_ECOLI (878 aa), 36% identity in 8 [...] (836 aa) |
| | tcfA | Putative fimbrial protein; Previously sequenced Salmonella typhi and Salmonella enterica fimbrial subunit proteins TsaA or TcfA TR:Q9XDS4 (EMBL:AB029403) (236 aa) fasta scores: E(): 0, 100.0% id in 236 aa, and to Escherichia coli cs1 fimbrial subunit B precursor CsoB or CooB SW:CSOB_ECOLI (P25731) (238 aa) fasta scores: E(): 5.3e-14, 34.6% id in 205 aa, and to Escherichia coli cfa/i fimbrial subunit A precursor cfaA SW:CFAA_ECOLI (P25732) (206 aa) fasta scores: E(): 1.4e-13, 32.8% id in 189 aa. Contains probable N-terminal signal sequence and appropriately positioned PS00013 Prokaryoti [...] (236 aa) |
| | STY0351 | Possible outer membrane adhesin; Similar to Escherichia coli heat resistant agglutinin 1 TR:Q46680 (EMBL:U07174) (247 aa) fasta scores: E(): 1.6e-18, 38.1% id in 257 aa, and to Escherichia coli tia invasion determinant precursor TR:Q46760 (EMBL:U20318) (251 aa) fasta scores: E(): 3.5e-14, 38.3% id in 256 aa, and to Salmonella typhimurium virulence membrane protein PagC precursor. virulence membrane protein pagc precursor SW:PAGC_SALTY () (188 aa) fasta scores: E(): 0.001, 25.5% id in 141 aa. (239 aa) |
| | STY0365 | Outer membrane pore protein E precursor; Uptake of inorganic phosphate, phosphorylated compounds, and some other negatively charged solutes; Belongs to the Gram-negative porin family. (350 aa) |
| | stbE | Similar to Klebsiella pneumoniae chaperone protein MrkB precursor mrkB SW:MRKB_KLEPN (P21646) (233 aa) fasta scores: E(): 9.3e-21, 32.4% id in 204 aa, and to Bordetella pertussis chaperone protein fimb/fhad precursor fimb or fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E(): 1.8e-18, 31.7% id in 221 aa; Fasta hit to YRAI_ECOLI (231 aa), 32% identity in 222 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 32% identity in 213 aa overlap; Fasta hit to SFMC_ECOLI (230 aa), 30% identity in 207 aa overlap; Fasta hit to YBGP_ECOLI (242 aa), 31% identity in 229 aa overlap; Paralogue of E. co [...] (252 aa) |
| | stbC | Similar to Escherichia coli outer membrane usher protein FimD precursor fimD SW:FIMD_ECOLI (P30130) (878 aa) fasta scores: E(): 0, 31.7% id in 877 aa, and to Salmonella typhimurium outer membrane usher protein FimD precursor fimD SW:FIMD_SALTY (P37924) (870 aa) fasta scores: E(): 0, 32.7% id in 860 aa; Fasta hit to YCBS_ECOLI (866 aa), 31% identity in 872 aa overlap; Fasta hit to YRAJ_ECOLI (838 aa), 32% identity in 840 aa overlap; Fasta hit to HTRE_ECOLI (865 aa), 31% identity in 853 aa overlap; Fasta hit to SFMD_ECOLI (867 aa), 32% identity in 856 aa overlap; Paralogue of E. coli fim [...] (853 aa) |
| | stbB | Similar to Escherichia coli chaperone protein EcpD precursor ecpD SW:ECPD_ECOLI (P33128) (246 aa) fasta scores: E(): 7.4e-32, 40.3% id in 248 aa, and to Bordetella pertussis chaperone protein fimb/fhad precursor fimb or fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E(): 3.2e-24, 38.5% id in 208 aa; Fasta hit to YEHC_ECOLI (239 aa), 39% identity in 258 aa overlap; Fasta hit to YFCS_ECOLI (250 aa), 34% identity in 233 aa overlap; Fasta hit to SFMC_ECOLI (230 aa), 33% identity in 236 aa overlap; Paralogue of E. coli ecpD (ECPD_ECOLI); Fasta hit to ECPD_ECOLI (246 aa), 40% identity in [...] (253 aa) |
| | STY0380 | Possible outer membrane protein; Similar to Salmonella typhimurium hypothetical 19.7 kDa protein TR:Q9RFV4 (EMBL:AF166275) (174 aa) fasta scores: E(): 0, 98.9% id in 174 aa, and to Yersinia enterocolitica attachment invasion locus protein precursor aiL SW:AIL_YEREN (P16454) (178 aa) fasta scores: E(): 4.3e-20, 40.2% id in 169 aa, and to Escherichia coli outer membrane protein x precursor ompX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 3.3e-15, 39.5% id in 157 aa, and to Salmonella typhimurium virulence membrane protein pagc precursor. virulence membrane protein pagc precursor S [...] (174 aa) |
| | STY0396 | Similar to Salmonella typhimurium ferrioxamine b receptor precursor SW:FOXA_SALTY () (374 aa) fasta scores: E(): 0, 97.8% id in 361 aa, and to Yersinia enterocolitica ferrioxamine receptor precursor foxA SW:FOXA_YEREN (Q01674) (710 aa) fasta scores: E(): 0, 40.9% id in 704 aa; Paralogue of E. coli fhuA (FHUA_ECOLI); Fasta hit to FHUA_ECOLI (747 aa), 36% identity in 738 aa overlap. (696 aa) |
| | STY0451 | Nucleoside-specific channel-forming protein tsx precursor; Functions as substrate-specific channel for nucleosides and deoxynucleosides; Belongs to the nucleoside-specific channel-forming outer membrane porin (Tsx) (TC 1.B.10) family. (287 aa) |
| | fimC | Fimbrial chaperone protein; Similar to Salmonella typhi FimC gene fimC TR:Q56085 (EMBL:X74602) (237 aa) fasta scores: E(): 0, 100.0% id in 237 aa, and to Salmonella typhimurium chaperone protein FimC precursor fimC SW:FIMC_SALTY (P37923) (230 aa) fasta scores: E(): 0, 98.3% id in 230 aa; Fasta hit to YEHC_ECOLI (239 aa), 30% identity in 231 aa overlap; Fasta hit to YCBR_ECOLI (233 aa), 41% identity in 219 aa overlap; Fasta hit to YRAI_ECOLI (231 aa), 40% identity in 228 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 34% identity in 242 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 48% i [...] (230 aa) |
| | fimD | Similar to Salmonella typhimurium outer membrane usher protein FimD precursor fimD SW:FIMD_SALTY (P37924) (870 aa) fasta scores: E(): 0, 98.0% id in 870 aa, and to Escherichia coli outer membrane usher protein SfmD precursor sfmD SW:SFMD_ECOLI (P77468) (867 aa) fasta scores: E(): 0, 70.0% id in 853 aa, and to Escherichia coli outer membrane usher protein FimD precursor fimD SW:FIMD_ECOLI (P30130) (878 aa) fasta scores: E(): 0, 47.6% id in 867 aa; Fasta hit to YCBS_ECOLI (866 aa), 48% identity in 869 aa overlap; Fasta hit to YRAJ_ECOLI (838 aa), 38% identity in 848 aa overlap; Fasta hit [...] (870 aa) |
| | STY0628 | Ferrienterobactin receptor precursor; Fasta hit to CIRA_ECOLI (663 aa), 33% identity in 768 aa overlap; Orthologue of E. coli fepA (FEPA_ECOLI); Fasta hit to FEPA_ECOLI (746 aa), 82% identity in 755 aa overlap. (751 aa) |
| | pagP | Antimicrobial peptide resistance and lipid A acylation protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. (190 aa) |
| | STY0698 | Rare lipoprotein B precursor; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. (196 aa) |
| | STY0795 | Peptidoglycan-associated lipoprotein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (174 aa) |
| | STY0796 | Putative exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (262 aa) |
| | STY0868 | Glutamine-binding periplasmic protein precursor; Fasta hit to FLIY_ECOLI (266 aa), 34% identity in 257 aa overlap; Fasta hit to HISJ_ECOLI (260 aa), 32% identity in 257 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 33% identity in 244 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 35% identity in 254 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 30% identity in 244 aa overlap; Orthologue of E. coli glnH (GLNH_ECOLI); Fasta hit to GLNH_ECOLI (248 aa), 97% identity in 248 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (248 aa) |
| | ompX | Similar to Escherichia coli outer membrane protein x precursor ompX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 0, 91.2% id in 171 aa, and to Yersinia enterocolitica attachment invasion locus protein precursor aiL SW:AIL_YEREN (P16454) (178 aa) fasta scores: E(): 6.1e-22, 43.3% id in 180 aa; Orthologue of E. coli ompX (OMPX_ECOLI); Fasta hit to OMPX_ECOLI (171 aa), 91% identity in 171 aa overlap. (171 aa) |
| | yliB | Putative ABC transporter periplasmic binding protein; Part of the ABC transporter complex GsiABCD involved in glutathione import. Binds glutathione. (512 aa) |
| | STY0920 | Arginine-binding periplasmic protein 2 precursor; Fasta hit to HISJ_ECOLI (260 aa), 41% identity in 256 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 33% identity in 220 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 39% identity in 253 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 32% identity in 244 aa overlap; Orthologue of E. coli artJ (ARTJ_ECOLI); Fasta hit to ARTJ_ECOLI (243 aa), 91% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa) |
| | STY0923 | Arginine-binding periplasmic protein 1 precursor; Fasta hit to HISJ_ECOLI (260 aa), 40% identity in 255 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 31% identity in 252 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 36% identity in 253 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 34% identity in 244 aa overlap; Orthologue of E. coli artI (ARTI_ECOLI); Fasta hit to ARTI_ECOLI (243 aa), 95% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa) |
| | STY1002 | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. (363 aa) |
| | STY1091 | Outer membrane protein A; With TolR probably plays a role in maintaining the position of the peptidoglycan cell wall in the periplasm. Acts as a porin with low permeability that allows slow penetration of small solutes; an internal gate slows down solute passage. (350 aa) |
| | STY1176 | Assembly/transport component in curli production; May be involved in the biogenesis of curli organelles. Belongs to the CsgG family. (277 aa) |
| | STY1219 | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (232 aa) |
| | STY1220 | Flagellar P-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. (367 aa) |
| | STY1247 | Putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family. (212 aa) |
| | STY1304 | Periplasmic oligopeptide-binding protein precursor; Fasta hit to YGIS_ECOLI (535 aa), 45% identity in 530 aa overlap; Fasta hit to MPPA_ECOLI (537 aa), 49% identity in 523 aa overlap; Orthologue of E. coli oppA (OPPA_ECOLI); Fasta hit to OPPA_ECOLI (543 aa), 84% identity in 543 aa overlap. (582 aa) |
| | STY1314 | TonB protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (242 aa) |
| | STY1319 | Putative outer membrane protein; Orthologue of E. coli yciD (OMPW_ECOLI); Fasta hit to OMPW_ECOLI (212 aa), 89% identity in 212 aa overlap. (212 aa) |
| | STY1369 | Peptide transport periplasmic protein SapA precursor; Fasta hit to DPPA_ECOLI (535 aa), 37% identity in 516 aa overlap; Orthologue of E. coli sapA (SAPA_ECOLI); Fasta hit to SAPA_ECOLI (547 aa), 90% identity in 549 aa overlap. (549 aa) |
| | STY1384 | Periplasmic murein peptide-binding protein MppA; Fasta hit to YGIS_ECOLI (535 aa), 43% identity in 527 aa overlap; Fasta hit to OPPA_ECOLI (543 aa), 48% identity in 539 aa overlap; Orthologue of E. coli MPPA_ECOLI; Fasta hit to MPPA_ECOLI (537 aa), 92% identity in 537 aa overlap. (537 aa) |
| | STY1478 | Probable TonB-dependent receptor YncD precursor; Orthologue of E. coli YNCD_ECOLI; Fasta hit to YNCD_ECOLI (700 aa), 85% identity in 706 aa overlap. (706 aa) |
| | STY1649 | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. (383 aa) |
| | STY1677 | Similar to Salmonella typhimurium outer membrane lipoprotein slyb precursor SLYB SW:SLYB_SALTY (Q53549) fasta scores: E(): 0, 100.0% id in 155 aa, and to Escherichia coli outer membrane lipoprotein slyb precursor SLYB SW:SLYB_ECOLI (P55741; P76183) fasta scores: E(): 0, 94.8% id in 155 aa, and to Serratia spATCC39006. outer membrane lipoprotein pcp PCP TR:Q9RA95 (EMBL:AF168597) fasta scores: E(): 0, 71.0% id in 155 aa; Orthologue of E. coli SLYB_ECOLI; Fasta hit to SLYB_ECOLI (155 aa), 95% identity in 155 aa overlap. (155 aa) |
| | ssaJ | Putative pathogenicity island lipoprotein; Similar to Salmonella typhimurium secretion system apparatus lipoprotein SsaJ SW:SSAJ_SALTY () (249 aa) fasta scores: E(): 0, 98.8% id in 249 aa. (249 aa) |
| | spiA | Similar to Salmonella typhimurium outer membrane secretory protein SpiA TR:P74864 (EMBL:U51927) (497 aa) fasta scores: E(): 0, 99.4% id in 497 aa, and to Yersinia pestis kim5 or yscc or ypcd1.52 TR:Q56974 (EMBL:M83225) (607 aa) fasta scores: E(): 7.8e-32, 32.9% id in 507 aa. (497 aa) |
| | STY1745 | Major outer membrane lipoprotein; A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane; Belongs to the Lpp family. (78 aa) |
| | lppB | Major outer membrane lipoprotein; A highly abundant outer membrane lipoprotein that controls the distance between the inner and outer membranes. The only protein known to be covalently linked to the peptidoglycan network (PGN). Also non-covalently binds the PGN. The link between the cell outer membrane and PGN contributes to maintenance of the structural and functional integrity of the cell envelope, and maintains the correct distance between the PGN and the outer membrane; Belongs to the Lpp family. (79 aa) |
| | STY1830 | Putative outer membrane protein; Similar to Escherichia coli hypothetical 27.8 kDa protein in gapA-rnd intergenic region precursor. protein yeaF precursor SW:YEAF_ECOLI () (248 aa) fasta scores: E(): 0, 83.9% id in 248 aa, and to Escherichia coli hypothetical 27.4 kDa protein in avtA-selB intergenic region precursor yiaT SW:YIAT_ECOLI (P37681) (246 aa) fasta scores: E(): 0, 41.6% id in 243 aa, and to Vibrio cholerae outer membrane protein ompV precursor. outer membrane protein ompV precursor SW:OMPV_VIBCH () (257 aa) fasta scores: E(): 3e-09, 23.4% id in 209 aa. (248 aa) |
| | STY1865 | Similar to Salmonella typhimurium putative substrate-binding protein oxd-6A TR:O34156 (EMBL:U94729) (528 aa) fasta scores: E(): 0, 98.9% id in 528 aa, and to Escherichia coli hypothetical 36.5 kDa protein in ureR 3'region TR:Q05633 (EMBL:L12007) (336 aa) fasta scores: E(): 0, 63.0% id in 319 aa, and to Streptomyces coelicolor putative substrate binding protein SC9B5.18 TR:Q9ZBG2 (EMBL:AL035206) (542 aa) fasta scores: E(): 6.1e-28, 30.7% id in 515 aa. (544 aa) |
| | STY1904 | Outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (207 aa) |
| | mltE | Membrane-bound lytic murein transglycosylase E; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain. (203 aa) |
| | STY2097 | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. (323 aa) |
| | fliY | Similar to Escherichia coli cystine-binding periplasmic protein precursor fliY SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 0, 92.5% id in 266 aa and Salmonella typhimurium FliY fliY TR:Q9ZNM2 (EMBL:AB010947) (266 aa) fasta scores: E(): 0, 98.9% id in 266 aa. Contains a probable N-terminal signal sequence; Orthologue of E. coli fliY (FLIY_ECOLI); Fasta hit to FLIY_ECOLI (266 aa), 93% identity in 266 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (266 aa) |
| | ompS1 | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. (394 aa) |
| | wza | Putative polysaccharide export protein; Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium. (379 aa) |
| | stcC | Similar to many e.g. Escherichia coli outer membrane usher protein HtrE precursor htrE SW:HTRE_ECOLI (P33129) (865 aa) fasta scores: E(): 0, 33.0% id in 854 aa. Contains probable N-terminbal signal sequence; Fasta hit to YCBS_ECOLI (866 aa), 31% identity in 804 aa overlap; Fasta hit to FIMD_ECOLI (878 aa), 31% identity in 835 aa overlap; Fasta hit to HTRE_ECOLI (865 aa), 33% identity in 855 aa overlap; Fasta hit to SFMD_ECOLI (867 aa), 31% identity in 828 aa overlap; Orthologue of E. coli yehB (YEHB_ECOLI); Fasta hit to YEHB_ECOLI (826 aa), 75% identity in 829 aa overlap. (829 aa) |
| | stcB | Similar to many e.g. Klebsiella pneumoniae chaperone protein MrkB precursor mrkB SW:MRKB_KLEPN (P21646) (233 aa) fasta scores: E(): 6.1e-26, 35.7% id in 235 aa and Bordetella pertussis chaperone protein precursor fimB or fhaD SW:FIMB_BORPE (P33409) (244 aa) fasta scores: E(): 8.7e-23, 33.8% id in 231 aa; Fasta hit to YRAI_ECOLI (231 aa), 30% identity in 220 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 33% identity in 216 aa overlap; Fasta hit to YFCS_ECOLI (250 aa), 35% identity in 222 aa overlap; Orthologue of E. coli yehC (YEHC_ECOLI); Fasta hit to YEHC_ECOLI (239 aa), 64% identity [...] (227 aa) |
| | STY2402 | Putative lipoprotein; Shows weak similarity to e.g. Pseudomonas aeruginosa outer membrane protein OprM precursor oprM or oprK SW:OPRM_PSEAE (Q51487; Q51444) (477 aa) fasta scores: E(): 7.1e-20, 25.5% id in 491 aa. Contains probable N-terminal signal sequence; Fasta hit to YJCP_ECOLI (488 aa), 37% identity in 488 aa overlap; Orthologue of E. coli yohG (YOHG_ECOLI); Fasta hit to YOHG_ECOLI (398 aa), 85% identity in 396 aa overlap. (478 aa) |
| | STY2424 | Similar to Salmonella typhimurium D-galactose-binding periplasmic protein precursor mglB SW:DGAL_SALTY (P23905) (332 aa) fasta scores: E(): 0, 99.1% id in 332 aa; Orthologue of E. coli mglB (DGAL_ECOLI); Fasta hit to DGAL_ECOLI (332 aa), 93% identity in 332 aa overlap. (332 aa) |
| | STY2434 | Colicin I receptor precursor; Fasta hit to FEPA_ECOLI (746 aa), 33% identity in 764 aa overlap; Orthologue of E. coli cirA (CIRA_ECOLI); Fasta hit to CIRA_ECOLI (663 aa), 88% identity in 663 aa overlap. (663 aa) |
| | STY2452 | Putative transport system periplasmic binding protein; Orthologue of E. coli yejA (YEJA_ECOLI); Fasta hit to YEJA_ECOLI (604 aa), 86% identity in 601 aa overlap. Contains probable N-terminal signal sequence. (601 aa) |
| | dsbE1 | Thiol:disulfide interchange protein; Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme lyase (By similarity); Belongs to the thioredoxin family. DsbE subfamily. (185 aa) |
| | ompC | Outer membrane protein C; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. (378 aa) |
| | STY2584 | Similar to Salmonella typhimurium histidine-binding periplasmic protein precursor hisJ SW:HISJ_SALTY (P02910) (260 aa) fasta scores: E(): 0, 99.2% id in 260 aa; Fasta hit to ARTI_ECOLI (243 aa), 39% identity in 255 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 67% identity in 259 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 41% identity in 255 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 30% identity in 257 aa overlap; Orthologue of E. coli hisJ (HISJ_ECOLI); Fasta hit to HISJ_ECOLI (260 aa), 97% identity in 260 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (260 aa) |
| | STY2585 | Similar to Salmonella typhimurium lysine-arginine-ornithine-binding periplasmic protein precursor argT SW:ARGT_SALTY (P02911) (260 aa) fasta scores: E(): 0, 99.2% id in 260 aa; Fasta hit to HISJ_ECOLI (260 aa), 68% identity in 259 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 34% identity in 255 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 36% identity in 254 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 32% identity in 253 aa overlap; Orthologue of E. coli argT (ARGT_ECOLI); Fasta hit to ARGT_ECOLI (260 aa), 92% identity in 260 aa overlap; Belongs to the bacterial solute-binding prot [...] (260 aa) |
| | STY2615 | Penicillin-insensitive murein endopeptidase precursor; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. Belongs to the peptidase M74 family. (274 aa) |
| | STY2623 | Long-chain fatty acid transport protein precursor; Involved in translocation of long-chain fatty acids across the outer membrane. FadL may form a specific channel (By similarity). Belongs to the OmpP1/FadL family. (437 aa) |
| | STY2632 | Similar to Salmonella typhimurium outer membrane protease E precursor pgtE or prtA SW:PGTE_SALTY (P06185) (296 aa) fasta scores: E(): 0, 96.8% id in 277 aa, Yersinia pestis coagulase/fibrinolysin precursor pla SW:COLY_YERPE (P17811) (312 aa) fasta scores: E(): 0, 71.5% id in 312 aa and Escherichia coli protease VII precursor ompT SW:OMPT_ECOLI (P09169) (317 aa) fasta scores: E(): 0, 46.9% id in 320 aa. (312 aa) |
| | STY2659 | Conserved hypothetical protein; Orthologue of E. coli yfeN (YFEN_ECOLI); Fasta hit to YFEN_ECOLI (254 aa), 85% identity in 254 aa overlap. (253 aa) |
| | STY2726 | Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (344 aa) |
| | STY2765 | Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (392 aa) |
| | STY2813 | Putative exported protein; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (475 aa) |
| | STY2852 | Putative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery. (245 aa) |
| | STY2871 | Small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (112 aa) |
| | iroN | Similar to Salmonella cholerae-suis TonB-dependent outer membrane siderophore receptor protein iroN TR:O54507 (EMBL:U97227) (727 aa) fasta scores: E(): 0, 99.9% id in 727 aa; Fasta hit to CIRA_ECOLI (663 aa), 34% identity in 731 aa overlap; Paralogue of E. coli fepA (FEPA_ECOLI); Fasta hit to FEPA_ECOLI (746 aa), 52% identity in 753 aa overlap. (726 aa) |
| | prgK | Pathogenicity 1 island effector protein; Similar to several proteins essential for protein secretion by a type III system: Salmonella typhimurium protein precursor PrgK required for invasion of epithelial cells SW:PRGK_SALTY (P41786) (252 aa) fasta scores: E(): 0, 99.6% id in 252 aa and Shigella flexneri lipoprotein MxiJ secretion protein SW:MXIJ_SHIFL (Q06081) (241 aa) fasta scores: E(): 0, 46.1% id in 243 aa. Contains a possible N-terminal signal sequence. (252 aa) |
| | invG | Secretory protein (associated with virulence); Highly similar to Salmonella typhimurium InvG protein precursor SW:INVG_SALTY (P35672) (562 aa) fasta scores: E(): 0, 99.1% id in 562 aa and to Shigella flexneri outer membrane protein MxiD SW:MXID_SHIFL (Q04641) (566 aa) fasta scores: E(): 0, 50.9% id in 489 aa. Contains a possible N-terminal signal sequence. (562 aa) |
| | steB | Similar to Salmonella typhimurium outer membrane usher protein StfC TR:O87658 (EMBL:AF093503) (885 aa) fasta scores: E(): 0, 53.3% id in 891 aa. Contains a possible N-terminal signal sequence. (899 aa) |
| | steC | Similar to Salmonella typhimurium periplasmic fimbrial chaperone StfD TR:O87659 (EMBL:AF093503) (250 aa) fasta scores: E(): 0, 52.4% id in 250 aa and to Escherichia coli hypothetical fimbrial chaperone SW:YFCS_ECOLI (250 aa) fasta scores: E(): 0, 52.1% id in 238 aa; Orthologue of E. coli YFCS_ECOLI; Fasta hit to YFCS_ECOLI (250 aa), 52% identity in 238 aa overlap. (257 aa) |
| | stdC | Weakly similar to Escherichia coli chaperone protein PapD involved in pili assembly SW:PAPD_ECOLI (P15319) (239 aa) fasta scores: E(): 5.9e-33, 37.8% id in 238 aa; Paralogue of E. coli YBGP_ECOLI; Fasta hit to YBGP_ECOLI (242 aa), 40% identity in 222 aa overlap. (247 aa) |
| | stdB | Similar to Escherichia coli hypothetical outer membrane usher protein YqiG SW:YQIG_ECOLI (P76655) (821 aa) fasta scores: E(): 0, 42.2% id in 812 aa. (829 aa) |
| | STY3179 | Similar to many members of the AiL/OmpX/PagC/LoM family of outer membrane proteins strongly associated with virulence e.g. Yersinia enterocolitica attachment invasion locus protein precursor AiL SW:AIL_YEREN (P16454) (178 aa) fasta scores: E(): 1.9e-13, 36.0% id in 186 aa and Escherichia coli outer membrane protein OmpX SW:OMPX_ECOLI (P36546) (171 aa) fasta scores: E(): 2.9e-07, 29.9% id in 184 aa. Contains a possible N-terminal signal sequence. (178 aa) |
| | mltC | Membrane-bound lytic murein transglycosylase C; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. (361 aa) |
| | STY3349 | SufI protein; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. (470 aa) |
| | STY3447 | Possible exported protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. (683 aa) |
| | STY3602 | Detergent-resistant phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities; Belongs to the phospholipase A1 family. (289 aa) |
| | STY3637 | Putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). (367 aa) |
| | STY3744 | Vitamin B12 receptor protein; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily. (614 aa) |
| | STY3793 | Putative ABC transport protein, solute-binding component; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the LsrC and LsrD permeases (By similarity). (340 aa) |
| | STY3862 | Conserved hypothetical protein; Outer membrane channel protein that allows an efficient diffusion of low-molecular-weight solutes such as small sugars and tetraglycine. However, the specific substrate recognized by the OmpL channel is unknown (By similarity); Belongs to the oligogalacturonate-specific porin KdgM (TC 1.B.35) family. OmpL subfamily. (230 aa) |
| | STY3894 | D-ribose-binding periplasmic protein; Part of the ABC transporter complex RbsABC involved in ribose import. Binds ribose. (296 aa) |
| | stgB | Similar to Escherichia coli chaperone protein precursor FocC SW:FOCC_ECOLI (P46008) (227 aa) fasta scores: E(): 1.1e-24, 34.9% id in 215 aa; Fasta hit to YRAI_ECOLI (231 aa), 38% identity in 219 aa overlap; Fasta hit to YBGP_ECOLI (242 aa), 34% identity in 224 aa overlap; Fasta hit to YEHC_ECOLI (239 aa), 32% identity in 226 aa overlap; Fasta hit to YFCS_ECOLI (250 aa), 34% identity in 231 aa overlap; Fasta hit to SFMC_ECOLI (230 aa), 35% identity in 226 aa overlap; Fasta hit to ECPD_ECOLI (246 aa), 36% identity in 226 aa overlap; Fasta hit to FIMC_ECOLI (241 aa), 34% identity in 215 a [...] (232 aa) |
| | STY3949 | Hypothetical protein. (379 aa) |
| | dsbE2 | Similar to Escherichia coli thiol:disulfide interchange protein DsbE or CcmG precursor SW:DSBE_ECOLI (P33926) (185 aa) fasta scores: E(): 0, 85.9% id in 185 aa. (185 aa) |
| | sapB | Putative autotransporter; Similar to e.g. Streptococcus gordonii streptococcal hemagglutinin hsA TR:Q9KWR3 (EMBL:AB029393) (2178 aa) fasta scores: E(): 2.5e-19, 20.6% id in 1108 aa, the C-terminal half of Haemophilus influenzae HsF protein hsF TR:P71401 (EMBL:U41852) (2353 aa) fasta scores: E(): 1.5e-14, 21.9% id in 1149 aa and Haemophilus influenzae adhesin hiA TR:Q48152 (EMBL:U38617) (1098 aa) fasta scores: E(): 6.9e-13, 22.7% id in 1136 aa; Previouly sequenced as Salmonella typhi CT18 SapB protein sapB TR:CAC14217 (EMBL:AJ277623) (1107 aa) fasta scores: E(): 0, 100.0% id in 1107 aa. (1107 aa) |
| | STY4157 | Putative outer membrane protein; Orthologue of E. coli yiaD (YIAD_ECOLI); Fasta hit to YIAD_ECOLI (219 aa), 95% identity in 219 aa overlap. Contains a possible N-terminal signal sequence; may be a lipoprotein. (220 aa) |
| | STY4168 | Periplasmic dipeptide transport protein precursor; Fasta hit to SAPA_ECOLI (547 aa), 36% identity in 513 aa overlap; Orthologue of E. coli dppA (DPPA_ECOLI); Fasta hit to DPPA_ECOLI (535 aa), 93% identity in 535 aa overlap. (535 aa) |
| | hofQ | Type II secretion system protein; Similar to Escherichia coli protein transport protein hofq precursor hofq or hopQ SW:HOFQ_ECOLI (P34749) (412 aa) fasta scores: E(): 0, 86.9% id in 412 aa. (412 aa) |
| | STY4427 | Maltoporin precursor; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family. (452 aa) |
| | aphA | Class B acid phosphatase precursor; Dephosphorylates several organic phosphate monoesters including monophosphate nucleotides (NMPs), coenzyme A (CoA), nicotinamide adenine dinucleotide phosphate (NADP), flavin mononucleotide (FMN) and phosphorylated 5-6 carbon sugars in vitro. Also has a phosphotransferase activity catalyzing the transfer of low-energy phosphate groups from organic phosphate monoesters to free hydroxyl groups of various organic compounds (By similarity). (237 aa) |
| | phoN | Similar to Salmonella typhimurium nonspecific acid phosphatase precursor phoN SW:PHON_SALTY (P26976) (250 aa) fasta scores: E(): 0, 94.8% id in 250 aa. (250 aa) |
| | vexD | Vi polysaccharide export inner-membrane protein; May form an ATP-driven capsule polysaccharide export apparatus, in association with the VexA, VexB and VexC proteins; Belongs to the BexC/CtrB/KpsE family. (434 aa) |
| | vexA | Vi polysaccharide export protein; May form an ATP-driven capsule polysaccharide export apparatus, in association with the VexB, VexC and VexD proteins. May function as a membrane anchor for the polysaccharide. Possible porin properties; Belongs to the BexD/CtrA/VexA family. (355 aa) |
| | blc | Putative lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (177 aa) |
| | artJ | Similar to Escherichia coli arginine-binding periplasmic protein 2 precursor artJ SW:ARTJ_ECOLI (P30860) (243 aa) fasta scores: E(): 0, 57.1% id in 238 aa and to Haemophilus influenzae arginine-binding periplasmic protein precursor artI or HI1179 SW:ARTI_HAEIN (P45091) (239 aa) fasta scores: E(): 0, 39.2% id in 240 aa; Belongs to the bacterial solute-binding protein 3 family. (239 aa) |
| | ytfM | Putative exported protein; Similar to Escherichia coli hypothetical 64.8 kDa protein in msra-chpbi intergenic region precursor ytfM SW:YTFM_ECOLI (P39320) (577 aa) fasta scores: E(): 0, 90.6% id in 575 aa. Contains a possible N-terminal signal sequence. (577 aa) |
| | sefB | Similar to Salmonella enteritidis chaperone protein SefB precursor SW:SEFB_SALEN (P33387) (246 aa) fasta scores: E(): 0, 99.2% id in 246 aa, and to Yersinia pestis, and Yersinia pseudotuberculosis chaperone protein PsaB precursor SW:PSAB_YERPE (P31523) (273 aa) fasta scores: E(): 4e-25, 33.5% id in 257 aa, and to Escherichia coli chaperone protein AggD precursor SW:AGGD_ECOLI (P46004) (252 aa) fasta scores: E(): 2.1e-23, 33.5% id in 209 aa. CDS DNA has a low GC content, 28.81%. (250 aa) |
| | sefC | Similar to Salmonella enteritidis outer membrane usher protein SefC precursor SW:SEFC_SALEN (P33388) (814 aa) fasta scores: E(): 0, 96.7% id in 838 aa, and to Salmonella typhimurium outer membrane usher protein FimD precursor fimD SW:FIMD_SALTY (P37924) (870 aa) fasta scores: E(): 0, 31.0% id in 836 aa. Identity with SefC is distrupted with Glycine-Valine repeat between codons 301 and 330. TTGGTG repeated 14 times. Possible effect on function. CDS DNA has a low GC content,35.71%. (838 aa) |
