STRINGSTRING
nirB nirB STY4475 STY4475 STY1287 STY1287 STY1288 STY1288 STY1487 STY1487 STY1488 STY1488 STY1489 STY1489 STY2485 STY2485 STY1289 STY1289 STY1290 STY1290 STY1486 STY1486 STY1485 STY1485 STY1291 STY1291 nirD nirD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nirBSimilar to Escherichia coli nitrite reductase [NAD nirB SW:NIRB_ECOLI (P08201) (847 aa) fasta scores: E(): 0, 95.0% id in 847 aa; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa)
STY4475Cytochrome c552 precursor; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (478 aa)
STY1287Nitrite extrusion protein (nitrite facilitator); Fasta hit to NARU_ECOLI (462 aa), 75% identity in 458 aa overlap; Orthologue of E. coli narK (NARK_ECOLI); Fasta hit to NARK_ECOLI (463 aa), 95% identity in 462 aa overlap. (465 aa)
STY1288Respiratory nitrate reductase 1 alpha chain; Fasta hit to NARZ_ECOLI (1245 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narG (NARG_ECOLI); Fasta hit to NARG_ECOLI (1246 aa), 95% identity in 1246 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa)
STY1487Respiratory nitrate reductase 2 beta chain; Fasta hit to NARH_ECOLI (512 aa), 80% identity in 506 aa overlap; Orthologue of E. coli narY (NARY_ECOLI); Fasta hit to NARY_ECOLI (514 aa), 95% identity in 514 aa overlap. (514 aa)
STY1488Respiratory nitrate reductase 2 alpha chain; Fasta hit to NARG_ECOLI (1246 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narZ (NARZ_ECOLI); Fasta hit to NARZ_ECOLI (1245 aa), 90% identity in 1245 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1242 aa)
STY1489Nitrite extrusion protein; Fasta hit to NARK_ECOLI (463 aa), 76% identity in 450 aa overlap; Orthologue of E. coli narU (NARU_ECOLI); Fasta hit to NARU_ECOLI (462 aa), 85% identity in 462 aa overlap. (462 aa)
STY2485Probable nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa)
STY1289Respiratory nitrate reductase 1 beta chain; Fasta hit to NARY_ECOLI (514 aa), 81% identity in 505 aa overlap; Orthologue of E. coli narH (NARH_ECOLI); Fasta hit to NARH_ECOLI (512 aa), 93% identity in 511 aa overlap. (511 aa)
STY1290Respiratory nitrate reductase 1 delta chain; Fasta hit to NARW_ECOLI (231 aa), 55% identity in 233 aa overlap; Orthologue of E. coli narJ (NARJ_ECOLI); Fasta hit to NARJ_ECOLI (236 aa), 88% identity in 236 aa overlap. (236 aa)
STY1486Respiratory nitrate reductase 2 delta chain; Fasta hit to NARJ_ECOLI (236 aa), 58% identity in 233 aa overlap; Orthologue of E. coli narW (NARW_ECOLI); Fasta hit to NARW_ECOLI (231 aa), 82% identity in 231 aa overlap. (231 aa)
STY1485Respiratory nitrate reductase 2 gamma chain; Fasta hit to NARI_ECOLI (225 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narV (NARV_ECOLI); Fasta hit to NARV_ECOLI (226 aa), 97% identity in 226 aa overlap. (226 aa)
STY1291Respiratory nitrate reductase 1 gamma chain; Fasta hit to NARV_ECOLI (226 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narI (NARI_ECOLI); Fasta hit to NARI_ECOLI (225 aa), 92% identity in 225 aa overlap. (225 aa)
nirDNitrite reductase (NAD(P)H) small subunit; Required for activity of the reductase. (108 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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