STRINGSTRING
STY0578 STY0578 STY0612 STY0612 STY0779 STY0779 STY0780 STY0780 STY0781 STY0781 STY0782 STY0782 STY0177 STY0177 STY1653 STY1653 fdrA fdrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY0578Conserved hypothetical protein; Orthologue of E. coli YLBE_ECOLI; Fasta hit to YLBE_ECOLI (419 aa), 94% identity in 365 aa overlap. (415 aa)
STY0612Similar to Escherichia coli probable pyridine nucleotide-disulfide oxidoreductase in eaeh-beta intergenic region ykgC SW:YKGC_ECOLI (P77212) (450 aa) fasta scores: E(): 0, 74.4% id in 441 aa, and to Bacillus megaterium mercuric reductase merA TR:O69256 (EMBL:Y09907) (631 aa) fasta scores: E(): 0, 34.1% id in 452 aa, and to Bacillus sp mercuric reductase merA SW:MERA_BACSR (P16171) (631 aa) fasta scores: E(): 0, 33.2% id in 452 aa; Fasta hit to GSHR_ECOLI (450 aa), 30% identity in 454 aa overlap; Orthologue of E. coli ykgC (YKGC_ECOLI); Fasta hit to YKGC_ECOLI (450 aa), 74% identity in [...] (441 aa)
STY07792-oxoglutarate dehydrogenase E1 component; Orthologue of E. coli sucA (ODO1_ECOLI); Fasta hit to ODO1_ECOLI (933 aa), 95% identity in 933 aa overlap. (933 aa)
STY0780Dihydrolipoamide succinyltransferase component (E2); E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (402 aa)
STY0781succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
STY0782succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa)
STY0177Dihydrolipoamide dehydrogenase; Orthologue of E. coli lpdA (DLDH_ECOLI); Fasta hit to DLDH_ECOLI (473 aa), 98% identity in 473 aa overlap. (475 aa)
STY1653Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (467 aa)
fdrAFdrA protein; Similar to Escherichia coli fdrA protein SW:FDRA_ECOLI (Q47208) (555 aa) fasta scores: E(): 0, 82.7% id in 555 aa, and to Escherichia coli hypothetical protein YahF SW:YAHF_ECOLI (P77187) (515 aa) fasta scores: E(): 0, 38.3% id in 512 aa, and to Bacillus subtilis succinyl-CoA synthetase alpha chain SucD SW:SUCD_BACSU (P80865) (299 aa) fasta scores: E(): 1.6e-05, 25.7% id in 183 aa; Fasta hit to YAHF_ECOLI (515 aa), 38% identity in 512 aa overlap; Orthologue of E. coli FDRA_ECOLI; Fasta hit to FDRA_ECOLI (555 aa), 83% identity in 555 aa overlap. (554 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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