STRINGSTRING
STY2585 STY2585 STY2813 STY2813 artJ artJ STY0868 STY0868 STY0923 STY0923 STY1438 STY1438 STY0920 STY0920 STY0710 STY0710 fliY fliY STY2584 STY2584
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY2585Similar to Salmonella typhimurium lysine-arginine-ornithine-binding periplasmic protein precursor argT SW:ARGT_SALTY (P02911) (260 aa) fasta scores: E(): 0, 99.2% id in 260 aa; Fasta hit to HISJ_ECOLI (260 aa), 68% identity in 259 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 34% identity in 255 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 36% identity in 254 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 32% identity in 253 aa overlap; Orthologue of E. coli argT (ARGT_ECOLI); Fasta hit to ARGT_ECOLI (260 aa), 92% identity in 260 aa overlap; Belongs to the bacterial solute-binding prot [...] (260 aa)
STY2813Putative exported protein; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family. (475 aa)
artJSimilar to Escherichia coli arginine-binding periplasmic protein 2 precursor artJ SW:ARTJ_ECOLI (P30860) (243 aa) fasta scores: E(): 0, 57.1% id in 238 aa and to Haemophilus influenzae arginine-binding periplasmic protein precursor artI or HI1179 SW:ARTI_HAEIN (P45091) (239 aa) fasta scores: E(): 0, 39.2% id in 240 aa; Belongs to the bacterial solute-binding protein 3 family. (239 aa)
STY0868Glutamine-binding periplasmic protein precursor; Fasta hit to FLIY_ECOLI (266 aa), 34% identity in 257 aa overlap; Fasta hit to HISJ_ECOLI (260 aa), 32% identity in 257 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 33% identity in 244 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 35% identity in 254 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 30% identity in 244 aa overlap; Orthologue of E. coli glnH (GLNH_ECOLI); Fasta hit to GLNH_ECOLI (248 aa), 97% identity in 248 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (248 aa)
STY0923Arginine-binding periplasmic protein 1 precursor; Fasta hit to HISJ_ECOLI (260 aa), 40% identity in 255 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 31% identity in 252 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 36% identity in 253 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 34% identity in 244 aa overlap; Orthologue of E. coli artI (ARTI_ECOLI); Fasta hit to ARTI_ECOLI (243 aa), 95% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
STY1438Putative periplasmic amino acid-binding protein; Similar to Escherichia coli glutamine-binding periplasmic protein precursor glnH SW:GLNH_ECOLI (P10344) (248 aa) fasta scores: E(): 1.3e-10, 26.4% id in 235 aa. (253 aa)
STY0920Arginine-binding periplasmic protein 2 precursor; Fasta hit to HISJ_ECOLI (260 aa), 41% identity in 256 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 33% identity in 220 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 39% identity in 253 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 32% identity in 244 aa overlap; Orthologue of E. coli artJ (ARTJ_ECOLI); Fasta hit to ARTJ_ECOLI (243 aa), 91% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
STY0710Similar to Escherichia coli amino-acid ABC transporter binding protein YbeJ precursor ybeJ SW:YBEJ_ECOLI (P37902; P41408; P77612) (302 aa) fasta scores: E(): 0, 93.0% id in 302 aa, and to Bacillus stearothermophilus glutamine-binding protein precursor glnH SW:GLNH_BACST (P27676) (262 aa) fasta scores: E(): 3.6e-14, 30.4% id in 263 aa; Orthologue of E. coli ybeJ (YBEJ_ECOLI); Fasta hit to YBEJ_ECOLI (302 aa), 93% identity in 302 aa overlap. (308 aa)
fliYSimilar to Escherichia coli cystine-binding periplasmic protein precursor fliY SW:FLIY_ECOLI (P39174) (266 aa) fasta scores: E(): 0, 92.5% id in 266 aa and Salmonella typhimurium FliY fliY TR:Q9ZNM2 (EMBL:AB010947) (266 aa) fasta scores: E(): 0, 98.9% id in 266 aa. Contains a probable N-terminal signal sequence; Orthologue of E. coli fliY (FLIY_ECOLI); Fasta hit to FLIY_ECOLI (266 aa), 93% identity in 266 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (266 aa)
STY2584Similar to Salmonella typhimurium histidine-binding periplasmic protein precursor hisJ SW:HISJ_SALTY (P02910) (260 aa) fasta scores: E(): 0, 99.2% id in 260 aa; Fasta hit to ARTI_ECOLI (243 aa), 39% identity in 255 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 67% identity in 259 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 41% identity in 255 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 30% identity in 257 aa overlap; Orthologue of E. coli hisJ (HISJ_ECOLI); Fasta hit to HISJ_ECOLI (260 aa), 97% identity in 260 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (260 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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