Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY4162 | STY4492 | gene:17588000 | gene:17588322 | Putative membrane protein; Similar to Salmonella typhimurium ATCC 14028 protein (fragment) SW:YHJW_SALTY (P43666) (295 aa) fasta scores: E(): 0, 98.6% id in 277 aa. N-terminus contains hydrophobic, probable membrane-spanning regions; Orthologue of E. coli yhjW (YHJW_ECOLI); Fasta hit to YHJW_ECOLI (574 aa), 85% identity in 562 aa overlap. | Putative membrane protein; Similar to Salmonella typhimurium hypothetical 61.6 kDa protein in basS/pmrA-adiY intergenic region YjdB SW:YJDB_SALTY (P36555) (547 aa) fasta scores: E(): 0, 99.6% id in 547 aa, and to Escherichia coli hypothetical 61.7 kDa protein in basS-adiY intergenic region YjdB SW:YJDB_ECOLI (P30845) (547 aa) fasta scores: E(): 0, 82.3% id in 547 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. | 0.929 |
| STY4492 | STY4162 | gene:17588322 | gene:17588000 | Putative membrane protein; Similar to Salmonella typhimurium hypothetical 61.6 kDa protein in basS/pmrA-adiY intergenic region YjdB SW:YJDB_SALTY (P36555) (547 aa) fasta scores: E(): 0, 99.6% id in 547 aa, and to Escherichia coli hypothetical 61.7 kDa protein in basS-adiY intergenic region YjdB SW:YJDB_ECOLI (P30845) (547 aa) fasta scores: E(): 0, 82.3% id in 547 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein. | Putative membrane protein; Similar to Salmonella typhimurium ATCC 14028 protein (fragment) SW:YHJW_SALTY (P43666) (295 aa) fasta scores: E(): 0, 98.6% id in 277 aa. N-terminus contains hydrophobic, probable membrane-spanning regions; Orthologue of E. coli yhjW (YHJW_ECOLI); Fasta hit to YHJW_ECOLI (574 aa), 85% identity in 562 aa overlap. | 0.929 |