STRINGSTRING
STY1289 STY1289 STY1487 STY1487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY1289Respiratory nitrate reductase 1 beta chain; Fasta hit to NARY_ECOLI (514 aa), 81% identity in 505 aa overlap; Orthologue of E. coli narH (NARH_ECOLI); Fasta hit to NARH_ECOLI (512 aa), 93% identity in 511 aa overlap. (511 aa)
STY1487Respiratory nitrate reductase 2 beta chain; Fasta hit to NARH_ECOLI (512 aa), 80% identity in 506 aa overlap; Orthologue of E. coli narY (NARY_ECOLI); Fasta hit to NARY_ECOLI (514 aa), 95% identity in 514 aa overlap. (514 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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