STRINGSTRING
STY0491 STY0491 STY0921 STY0921 STY0920 STY0920 STY4138 STY4138 STY4137 STY4137 STY3789 STY3789 STY2581 STY2581 STY1089 STY1089 STY0943 STY0943 STY0923 STY0923 STY0922 STY0922 artJ artJ STY0012 STY0012
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
STY0491ATP-dependent clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (423 aa)
STY0921Arginine transport system permease protein ArtM; Fasta hit to ARTQ_ECOLI (238 aa), 30% identity in 237 aa overlap; Fasta hit to YECS_ECOLI (222 aa), 35% identity in 223 aa overlap; Fasta hit to HISM_ECOLI (238 aa), 35% identity in 211 aa overlap; Orthologue of E. coli artM (ARTM_ECOLI); Fasta hit to ARTM_ECOLI (222 aa), 94% identity in 222 aa overlap. (222 aa)
STY0920Arginine-binding periplasmic protein 2 precursor; Fasta hit to HISJ_ECOLI (260 aa), 41% identity in 256 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 33% identity in 220 aa overlap; Fasta hit to ARTI_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 39% identity in 253 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 32% identity in 244 aa overlap; Orthologue of E. coli artJ (ARTJ_ECOLI); Fasta hit to ARTJ_ECOLI (243 aa), 91% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
STY4138Xylulose kinase; Orthologue of E. coli xylB (XYLB_ECOLI); Fasta hit to XYLB_ECOLI (484 aa), 86% identity in 484 aa overlap. (484 aa)
STY4137D-xylose isomerase; Orthologue of E. coli xylA (XYLA_ECOLI); Fasta hit to XYLA_ECOLI (440 aa), 92% identity in 440 aa overlap; Belongs to the xylose isomerase family. (440 aa)
STY3789Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (255 aa)
STY2581Similar to Salmonella typhimurium histidine transport ATP-binding protein HisP hisP SW:HISP_SALTY (P02915) (258 aa) fasta scores: E(): 0, 98.8% id in 258 aa; Fasta hit to ARTP_ECOLI (242 aa), 44% identity in 238 aa overlap; Fasta hit to FEPC_ECOLI (271 aa), 31% identity in 229 aa overlap; Fasta hit to SSUB_ECOLI (255 aa), 36% identity in 219 aa overlap; Fasta hit to YCFV_ECOLI (233 aa), 35% identity in 238 aa overlap; Fasta hit to YBBA_ECOLI (228 aa), 36% identity in 239 aa overlap; Fasta hit to FECE_ECOLI (255 aa), 31% identity in 238 aa overlap; Fasta hit to PHNK_ECOLI (252 aa), 30% [...] (258 aa)
STY1089Conserved hypothetical protein; Similar to Haemophilus influenzae protease la homolog LON-B OR HI1324 SW:LONH_HAEIN (P43865) fasta scores: E(): 0, 41.1% id in 584 aa; Orthologue of E. coli P75867; Fasta hit to P75867 (586 aa), 86% identity in 586 aa overlap. (586 aa)
STY0943ATP-dependent Clp protease ATP-binding subunit ClpA; Fasta hit to CLPB_ECOLI (857 aa), 36% identity in 863 aa overlap; Orthologue of E. coli clpA (CLPA_ECOLI); Fasta hit to CLPA_ECOLI (758 aa), 97% identity in 758 aa overlap; Belongs to the ClpA/ClpB family. (758 aa)
STY0923Arginine-binding periplasmic protein 1 precursor; Fasta hit to HISJ_ECOLI (260 aa), 40% identity in 255 aa overlap; Fasta hit to FLIY_ECOLI (266 aa), 31% identity in 252 aa overlap; Fasta hit to ARGT_ECOLI (260 aa), 36% identity in 253 aa overlap; Fasta hit to ARTJ_ECOLI (243 aa), 63% identity in 243 aa overlap; Fasta hit to GLNH_ECOLI (248 aa), 34% identity in 244 aa overlap; Orthologue of E. coli artI (ARTI_ECOLI); Fasta hit to ARTI_ECOLI (243 aa), 95% identity in 243 aa overlap; Belongs to the bacterial solute-binding protein 3 family. (243 aa)
STY0922Arginine transport system permease protein ArtQ; Fasta hit to YECS_ECOLI (222 aa), 32% identity in 240 aa overlap; Fasta hit to HISQ_ECOLI (228 aa), 33% identity in 228 aa overlap; Orthologue of E. coli artQ (ARTQ_ECOLI); Fasta hit to ARTQ_ECOLI (238 aa), 95% identity in 237 aa overlap. (238 aa)
artJSimilar to Escherichia coli arginine-binding periplasmic protein 2 precursor artJ SW:ARTJ_ECOLI (P30860) (243 aa) fasta scores: E(): 0, 57.1% id in 238 aa and to Haemophilus influenzae arginine-binding periplasmic protein precursor artI or HI1179 SW:ARTI_HAEIN (P45091) (239 aa) fasta scores: E(): 0, 39.2% id in 240 aa; Belongs to the bacterial solute-binding protein 3 family. (239 aa)
STY0012DnaK protein (heat shock protein 70); Acts as a chaperone. (638 aa)
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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