Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY1002 | STY1649 | gene:17584990 | gene:17585584 | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.596 |
| STY1002 | STY2097 | gene:17584990 | gene:17586005 | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.649 |
| STY1002 | fliC | gene:17584990 | gene:17586075 | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.430 |
| STY1002 | ompS1 | gene:17584990 | gene:17586111 | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.575 |
| STY1498 | fliC | gene:17585448 | gene:17586075 | Haemolysin HlyE; Toxin, which has some hemolytic activity towards mammalian cells. Acts by forming a pore-like structure upon contact with mammalian cells (By similarity); Belongs to the hemolysin E family. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.564 |
| STY1649 | STY1002 | gene:17585584 | gene:17584990 | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | 0.596 |
| STY1649 | STY2097 | gene:17585584 | gene:17586005 | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.575 |
| STY1649 | ompS1 | gene:17585584 | gene:17586111 | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.697 |
| STY2097 | STY1002 | gene:17586005 | gene:17584990 | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | 0.649 |
| STY2097 | STY1649 | gene:17586005 | gene:17585584 | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.575 |
| STY2097 | ompS1 | gene:17586005 | gene:17586111 | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.582 |
| STY4282 | fliC | gene:17588113 | gene:17586075 | Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.409 |
| fliC | STY1002 | gene:17586075 | gene:17584990 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | 0.430 |
| fliC | STY1498 | gene:17586075 | gene:17585448 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Haemolysin HlyE; Toxin, which has some hemolytic activity towards mammalian cells. Acts by forming a pore-like structure upon contact with mammalian cells (By similarity); Belongs to the hemolysin E family. | 0.564 |
| fliC | STY4282 | gene:17586075 | gene:17588113 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.409 |
| ompS1 | STY1002 | gene:17586111 | gene:17584990 | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Outer membrane protein F precursor; Forms pores that allow passive diffusion of small molecules across the outer membrane; Belongs to the Gram-negative porin family. | 0.575 |
| ompS1 | STY1649 | gene:17586111 | gene:17585584 | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Outer membrane protein; Forms pores that allow passive diffusion of small molecules across the outer membrane. | 0.697 |
| ompS1 | STY2097 | gene:17586111 | gene:17586005 | Outer membrane protein S1; Forms pores that allow passive diffusion of small molecules across the outer membrane. | Lipid A acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A. | 0.582 |