Your Input: | |
| | STY0002 | Aspartokinase I/homoserine dehydrogenase I; Orthologue of E. coli thrA (AK1H_ECOLI); Fasta hit to AK1H_ECOLI (820 aa), 94% identity in 820 aa overlap; In the C-terminal section; belongs to the homoserine dehydrogenase family. (820 aa) |
| | STY0003 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (309 aa) |
| | STY0004 | Threonine synthase; Orthologue of E. coli thrC (THRC_ECOLI); Fasta hit to THRC_ECOLI (428 aa), 93% identity in 428 aa overlap. (428 aa) |
| | STY0007 | Transaldolase B; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (317 aa) |
| | oadB | Oxaloacetate decarboxylase beta chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation. (433 aa) |
| | STY0073 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (273 aa) |
| | STY0118 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). (231 aa) |
| | STY0175 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa) |
| | STY0176 | Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (629 aa) |
| | STY0177 | Dihydrolipoamide dehydrogenase; Orthologue of E. coli lpdA (DLDH_ECOLI); Fasta hit to DLDH_ECOLI (473 aa), 98% identity in 473 aa overlap. (475 aa) |
| | STY0181 | Aconitate hydratase 2 (citrate hydro-lyase 2); Orthologue of E. coli acnB (ACO2_ECOLI); Fasta hit to ACO2_ECOLI (865 aa), 96% identity in 865 aa overlap; Belongs to the aconitase/IPM isomerase family. (865 aa) |
| | STY0223 | Glutamate-1-semialdehyde 2,1-aminomutase; Fasta hit to GOAG_ECOLI (421 aa), 33% identity in 354 aa overlap; Fasta hit to GABT_ECOLI (426 aa), 32% identity in 421 aa overlap; Orthologue of E. coli hemL (GSA_ECOLI); Fasta hit to GSA_ECOLI (426 aa), 98% identity in 426 aa overlap. (426 aa) |
| | STY0236 | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Orthologue of E. coli dapD (DAPD_ECOLI); Fasta hit to DAPD_ECOLI (274 aa), 96% identity in 274 aa overlap; Belongs to the transferase hexapeptide repeat family. (274 aa) |
| | STY0255 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa) |
| | STY0259 | Lysine decarboxylase; Fasta hit to ADI_ECOLI (755 aa), 35% identity in 720 aa overlap; Fasta hit to DCOS_ECOLI (732 aa), 32% identity in 694 aa overlap; Fasta hit to DCOR_ECOLI (731 aa), 35% identity in 626 aa overlap; Fasta hit to DCLY_ECOLI (715 aa), 71% identity in 710 aa overlap; Orthologue of E. coli ldcC (DCLZ_ECOLI); Fasta hit to DCLZ_ECOLI (713 aa), 91% identity in 712 aa overlap. (713 aa) |
| | STY0404 | Delta-aminolevulinic acid dehydratase; Orthologue of E. coli hemB (HEM2_ECOLI); Fasta hit to HEM2_ECOLI (323 aa), 94% identity in 323 aa overlap; Belongs to the ALAD family. (324 aa) |
| | phnW | 2-aminoethylphosphonate:pyruvate aminotransferase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (367 aa) |
| | phnX | Phosphonoacetaldehyde phosphonohydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family. (269 aa) |
| | STY0501 | Putative lyase; Similar to Mycobacterium tuberculosis putative lyase rv3684 or mtv025.032 TR:O69652 (EMBL:AL022121) (346 aa) fasta scores: E(): 0, 61.5% id in 338 aa, and to Cyanidioschyzon merolae O-acetylserine cmoastl2 TR:Q9SSV8 (EMBL:AB031004) (390 aa) fasta scores: E(): 2.3e-16, 27.4% id in 329 aa, and to Emericella nidulans cysteine synthase cysB SW:CYSK_EMENI (P50867) (371 aa) fasta scores: E(): 1.7e-14, 25.6% id in 332 aa. (351 aa) |
| | allB | Putative allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family. (453 aa) |
| | glxK | Glycerate kinase; Similar to Escherichia coli glycerate kinase glxk or glxb5 SW:GLXK_ECOLI (P77364) (381 aa) fasta scores: E(): 0, 79.9% id in 379 aa, and to Escherichia coli glycerate kinase garK SW:GARK_ECOLI (P23524) (381 aa) fasta scores: E(): 0, 57.4% id in 376 aa; Fasta hit to YHAD_ECOLI (381 aa), 57% identity in 376 aa overlap; Orthologue of E. coli YBBZ_ECOLI; Fasta hit to YBBZ_ECOLI (381 aa), 80% identity in 379 aa overlap; Belongs to the glycerate kinase type-1 family. (382 aa) |
| | STY0574 | Similar to Escherichia coli hypothetical 28.7 kDa protein in gip-fdra intergenic region (glxB6 TR:O54410 (EMBL:AE000157)) SW:YLBA_ECOLI (P75713) (261 aa) fasta scores: E(): 0, 92.3% id in 261 aa; Orthologue of E. coli YLBA_ECOLI; Fasta hit to YLBA_ECOLI (261 aa), 92% identity in 261 aa overlap. (261 aa) |
| | allC | Similar to Escherichia coli allantoate amidohydrolase allc or glxb7 SW:ALLC_ECOLI (P77425) (411 aa) fasta scores: E(): 0, 88.1% id in 411 aa, and to Bacillus subtilis probable allantoate amidohydrolase yurH SW:ALLC_BACSU (O32149) (412 aa) fasta scores: E(): 0, 47.8% id in 404 aa; Orthologue of E. coli YLBB_ECOLI; Fasta hit to YLBB_ECOLI (411 aa), 88% identity in 411 aa overlap. (411 aa) |
| | allD | Similar to Escherichia coli ureidoglycolate dehydrogenase alld or glxb8 SW:ALLD_ECOLI (P77555) (349 aa) fasta scores: E(): 0, 86.2% id in 349 aa, and to Methanothermus fervidus malate dehydrogenase mdH SW:MDH_METFE (P16142) (339 aa) fasta scores: E(): 0, 36.4% id in 343 aa; Orthologue of E. coli YLBC_ECOLI; Fasta hit to YLBC_ECOLI (349 aa), 86% identity in 349 aa overlap; Belongs to the LDH2/MDH2 oxidoreductase family. (349 aa) |
| | arcC | Carbamate kinase; Similar to Escherichia coli carbamate kinase arcC SW:ARCC_ECOLI (P37306; P77419) (297 aa) fasta scores: E(): 0, 86.9% id in 297 aa, and to Pseudomonas aeruginosa carbamate kinase arcC SW:ARCC_PSEAE (P13982) (310 aa) fasta scores: E(): 0, 52.7% id in 296 aa; Fasta hit to ARCM_ECOLI (316 aa), 40% identity in 317 aa overlap; Fasta hit to ARCL_ECOLI (310 aa), 40% identity in 315 aa overlap; Orthologue of E. coli ybcF (ARCC_ECOLI); Fasta hit to ARCC_ECOLI (297 aa), 87% identity in 297 aa overlap. (297 aa) |
| | STY0588 | FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (288 aa) |
| | STY0620 | Oxygen-insensitive NAD(P)H nitroreductase; Orthologue of E. coli nfnB (NFNB_ECOLI); Fasta hit to NFNB_ECOLI (217 aa), 88% identity in 217 aa overlap. (217 aa) |
| | STY0736 | Phosphoglucomutase; Orthologue of E. coli pgm (PGMU_ECOLI); Fasta hit to PGMU_ECOLI (546 aa), 98% identity in 546 aa overlap. (546 aa) |
| | STY0773 | Citrate synthase; Fasta hit to CISZ_ECOLI (389 aa), 31% identity in 369 aa overlap; Orthologue of E. coli gltA (CISY_ECOLI); Fasta hit to CISY_ECOLI (427 aa), 96% identity in 427 aa overlap; Belongs to the citrate synthase family. (427 aa) |
| | STY0775 | Succinate dehydrogenase cytochrome b-556 subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (129 aa) |
| | STY0776 | Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa) |
| | STY0777 | Succinate dehydrogenase flavoprotein subunit; Fasta hit to NADB_ECOLI (540 aa), 32% identity in 570 aa overlap; Fasta hit to FRDA_ECOLI (601 aa), 43% identity in 597 aa overlap; Orthologue of E. coli sdhA (DHSA_ECOLI); Fasta hit to DHSA_ECOLI (588 aa), 98% identity in 588 aa overlap; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa) |
| | STY0778 | Succinate dehydrogenase iron-sulfur protein; Fasta hit to FRDB_ECOLI (243 aa), 37% identity in 235 aa overlap; Orthologue of E. coli sdhB (DHSB_ECOLI); Fasta hit to DHSB_ECOLI (238 aa), 96% identity in 238 aa overlap; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (239 aa) |
| | STY0779 | 2-oxoglutarate dehydrogenase E1 component; Orthologue of E. coli sucA (ODO1_ECOLI); Fasta hit to ODO1_ECOLI (933 aa), 95% identity in 933 aa overlap. (933 aa) |
| | STY0780 | Dihydrolipoamide succinyltransferase component (E2); E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (402 aa) |
| | STY0781 | succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa) |
| | STY0782 | succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (289 aa) |
| | STY0804 | Phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (250 aa) |
| | STY0806 | Aldose 1-epimerase (mutarotase); Converts alpha-aldose to the beta-anomer. (346 aa) |
| | STY0818 | Conserved hypothetical protein; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate. (331 aa) |
| | ybiW | Similar to Escherichia coli putative formate acetyltransferase 3 ybiW SW:PFLF_ECOLI (P75793) (810 aa) fasta scores: E(): 0, 95.7% id in 810 aa, and to Escherichia coli formate acetyltransferase 2 pflD SW:PFLD_ECOLI (P32674) (765 aa) fasta scores: E(): 0, 38.1% id in 806 aa; Fasta hit to PFLD_ECOLI (765 aa), 38% identity in 805 aa overlap; Orthologue of E. coli PFLF_ECOLI; Fasta hit to PFLF_ECOLI (810 aa), 96% identity in 810 aa overlap. (810 aa) |
| | nfsA | Similar to Salmonella typhimurium oxygen-insensitive NADPH nitroreductase SW:NFSA_SALTY (Q9Z5Z2) (240 aa) fasta scores: E(): 0, 96.3% id in 240 aa, and to Escherichia coli oxygen-insensitive NADPH nitroreductase SW:NFSA_ECOLI (P17117) (240 aa) fasta scores: E(): 0, 87.5% id in 240 aa, and to Vibrio harveyi NADPH-flavin oxidoreductase frP SW:FRP_VIBHA (Q56691) (240 aa) fasta scores: E(): 0, 51.3% id in 240 aa; Orthologue of E. coli mdaA (NFSA_ECOLI); Fasta hit to NFSA_ECOLI (240 aa), 88% identity in 240 aa overlap. (240 aa) |
| | STY0917 | Possible transport protein; Similar to Escherichia coli putative transport protein SgaT sgaT SW:SGAT_ECOLI (P39301) (484 aa) fasta scores: E(): 0, 39.0% id in 431 aa, and to Mycoplasma pneumoniae sgat protein homolog SW:SGAT_MYCPN (P75291) (660 aa) fasta scores: E(): 4e-09, 29.0% id in 428 aa; Paralogue of E. coli yjfS (SGAT_ECOLI); Fasta hit to SGAT_ECOLI (484 aa), 39% identity in 431 aa overlap. (447 aa) |
| | STY0918 | Similar to Escherichia coli unknown pentitol phosphotransferase enzyme ii, b component sgaB SW:PTXB_ECOLI (P39302) (101 aa) fasta scores: E(): 0.00016, 25.3% id in 99 aa, and to Borrelia burgdorferi pts system, cellobiose-specific iib component bbb06 TR:O50982 (EMBL:AE000792) (105 aa) fasta scores: E(): 0.92, 28.6% id in 105 aa. (106 aa) |
| | ybjU | Similar to Escherichia coli L-allo-threonine aldolase ybjU SW:LTAA_ECOLI (P75823) (333 aa) fasta scores: E(): 0, 89.2% id in 333 aa, and to Aeromonas jandaei L-allo-threonine aldolase ltaA SW:LTAA_AERJA (O07051) (338 aa) fasta scores: E(): 0, 53.5% id in 333 aa; Orthologue of E. coli LTAA_ECOLI; Fasta hit to LTAA_ECOLI (333 aa), 89% identity in 333 aa overlap. (333 aa) |
| | STY0973 | Formate acetyltransferase 1; Fasta hit to TDCE_ECOLI (746 aa), 79% identity in 736 aa overlap; Orthologue of E. coli pflB (PFLB_ECOLI); Fasta hit to PFLB_ECOLI (759 aa), 96% identity in 759 aa overlap. (760 aa) |
| | STY0977 | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (362 aa) |
| | STY1098 | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (152 aa) |
| | STY1110 | Similar to Gallus gallus acylphosphatase, muscle type isozyme SW:ACYM_CHICK (P07031) fasta scores: E(): 6.1e-08, 39.5% id in 86 aa; Orthologue of E. coli ACYP_ECOLI; Fasta hit to ACYP_ECOLI (92 aa), 78% identity in 92 aa overlap. (93 aa) |
| | STY1129 | Putative exported protein; Catalyzes the hydrolysis of 5-hydroxyisourate (HIU) to 2-oxo- 4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). (136 aa) |
| | hpaC | 4-hydroxyphenylacetate 3-monooxygenase coupling protein; Catalyzes the reduction of free flavins (FMN, FAD and riboflavin) by NADH. Subsequently, the reduced flavins diffuse to the large HpaB component or to other electron acceptors such as cytochrome c and Fe(3+) ion (By similarity); Belongs to the non-flavoprotein flavin reductase family. HpaC subfamily. (170 aa) |
| | hpaB | Similar to Escherichia coli 4-hydroxyphenylacetate 3-monooxygenase hpaB TR:Q57160 (EMBL:Z37980) fasta scores: E(): 0, 95.6% id in 435 aa. Note discrepency in position of translational start site. (435 aa) |
| | hpaG | Similar to Escherichia coli 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase hpaG SW:HPAG_ECOLI (Q46978) fasta scores: E(): 0, 84.0% id in 430 aa. (429 aa) |
| | hpcB | Similar to Escherichia coli 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpcB SW:HPCB_ECOLI (Q05353) fasta scores: E(): 0, 92.3% id in 259 aa. (283 aa) |
| | hpcD | Similar to Escherichia coli 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpcD SW:HPCD_ECOLI (Q05354) fasta scores: E(): 0, 81.6% id in 125 aa. (126 aa) |
| | hpcG | Similar to Escherichia coli 2-oxo-hepta-3-ene-1,7-dioic acid hydratase hpcG SW:HPCG_ECOLI (P42270) fasta scores: E(): 0, 90.6% id in 267 aa. (267 aa) |
| | hpcH | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Catalyzes the reversible retro-aldol cleavage of 4-hydroxy-2- ketoheptane-1,7-dioate (HKHD) to pyruvate and succinic semialdehyde. (263 aa) |
| | STY1153 | Glucose-1-phosphatase precursor (G1Pase), secreted; Fasta hit to PPA_ECOLI (432 aa), 33% identity in 409 aa overlap; Orthologue of E. coli agp (AGP_ECOLI); Fasta hit to AGP_ECOLI (413 aa), 83% identity in 413 aa overlap. (413 aa) |
| | STY1172 | Putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. (312 aa) |
| | STY1278 | Isocitrate dehydrogenase; Orthologue of E. coli icdA (IDH_ECOLI); Fasta hit to IDH_ECOLI (416 aa), 97% identity in 416 aa overlap. (416 aa) |
| | STY1288 | Respiratory nitrate reductase 1 alpha chain; Fasta hit to NARZ_ECOLI (1245 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narG (NARG_ECOLI); Fasta hit to NARG_ECOLI (1246 aa), 95% identity in 1246 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1247 aa) |
| | STY1289 | Respiratory nitrate reductase 1 beta chain; Fasta hit to NARY_ECOLI (514 aa), 81% identity in 505 aa overlap; Orthologue of E. coli narH (NARH_ECOLI); Fasta hit to NARH_ECOLI (512 aa), 93% identity in 511 aa overlap. (511 aa) |
| | STY1291 | Respiratory nitrate reductase 1 gamma chain; Fasta hit to NARV_ECOLI (226 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narI (NARI_ECOLI); Fasta hit to NARI_ECOLI (225 aa), 92% identity in 225 aa overlap. (225 aa) |
| | adh | Alcohol dehydrogenase; Similar to Escherichia coli aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase adhE or ana SW:ADHE_ECOLI (P17547) (890 aa) fasta scores: E(): 0, 97.3% id in 892 aa; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (892 aa) |
| | STY1339 | Aconitate hydratase 1 (citrate hydro-lyase 1); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (891 aa) |
| | STY1419 | Similar to Escherichia coli probable pyruvate-flavodoxin oxidoreductase ydbK SW:NIFJ_ECOLI (P52647; P77238) (1174 aa) fasta scores: E(): 0, 92.9% id in 1174 aa; Orthologue of E. coli NIFJ_ECOLI; Fasta hit to NIFJ_ECOLI (1174 aa), 93% identity in 1174 aa overlap. (1174 aa) |
| | STY1422 | D-lactate dehydrogenase; Orthologue of E. coli ldhA (LDHD_ECOLI); Fasta hit to LDHD_ECOLI (329 aa), 95% identity in 328 aa overlap; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa) |
| | STY1467 | Putative aldehyde dehydrogenase; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (481 aa) |
| | STY1485 | Respiratory nitrate reductase 2 gamma chain; Fasta hit to NARI_ECOLI (225 aa), 72% identity in 224 aa overlap; Orthologue of E. coli narV (NARV_ECOLI); Fasta hit to NARV_ECOLI (226 aa), 97% identity in 226 aa overlap. (226 aa) |
| | STY1487 | Respiratory nitrate reductase 2 beta chain; Fasta hit to NARH_ECOLI (512 aa), 80% identity in 506 aa overlap; Orthologue of E. coli narY (NARY_ECOLI); Fasta hit to NARY_ECOLI (514 aa), 95% identity in 514 aa overlap. (514 aa) |
| | STY1488 | Respiratory nitrate reductase 2 alpha chain; Fasta hit to NARG_ECOLI (1246 aa), 79% identity in 1247 aa overlap; Orthologue of E. coli narZ (NARZ_ECOLI); Fasta hit to NARZ_ECOLI (1245 aa), 90% identity in 1245 aa overlap; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1242 aa) |
| | STY1493 | Alcohol dehydrogenase; Fasta hit to ADH3_ECOLI (369 aa), 32% identity in 373 aa overlap; Orthologue of E. coli ADHP_ECOLI; Fasta hit to ADHP_ECOLI (336 aa), 93% identity in 335 aa overlap. (336 aa) |
| | STY1523 | Uptake hydrogenase small subunit; Fasta hit to MBHT_ECOLI (372 aa), 40% identity in 366 aa overlap; Orthologue of E. coli hyaA (MBHS_ECOLI); Fasta hit to MBHS_ECOLI (372 aa), 73% identity in 360 aa overlap. (367 aa) |
| | STY1536 | Similar to Escherichia coli aldehyde-dehydrogenase like protein YneI yneI SW:YNEI_ECOLI (P76149; P78220) (462 aa) fasta scores: E(): 0, 79.6% id in 353 aa, and to Escherichia coli aldehyde dehydrogenase A aldA SW:ALDA_ECOLI (P25553) (478 aa) fasta scores: E(): 0, 36.8% id in 348 aa. Contains C-terminal truncation. (375 aa) |
| | STY1653 | Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (467 aa) |
| | fumA | Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (548 aa) |
| | STY1674 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (218 aa) |
| | nemA | Similar to Escherichia coli N-ethylmaleimide reductase nemA SW:NEMA_ECOLI (P77258) (365 aa) fasta scores: E(): 0, 92.3% id in 365 aa, and to Enterobacter cloacae pentaerythritol tetranitrate reductase onR TR:P71278 (EMBL:U68759) (365 aa) fasta scores: E(): 0, 87.7% id in 365 aa. (365 aa) |
| | ydhZ | Conserved hypothetical protein; In vitro catalyzes the addition of water to fumarate, forming malate. Cannot catalyze the reverse reaction. Cannot use the cis-isomer maleate as substrate; Belongs to the FumD family. (70 aa) |
| | ttrB | Similar to Salmonella typhimurium tetrathionate reductase subunit B TtrB TR:Q9Z4S8 (EMBL:AJ224978) (250 aa) fasta scores: E(): 0, 100.0% id in 250 aa and to Salmonella typhimurium thiosulfate reductase electron transport protein PhsB SW:PHSB_SALTY (P37601) (192 aa) fasta scores: E(): 1.1e-25, 46.4% id in 151 aa; Fasta hit to P77375 (239 aa), 33% identity in 228 aa overlap; Paralogue of E. coli nrfC (NRFC_ECOLI); Fasta hit to NRFC_ECOLI (223 aa), 41% identity in 222 aa overlap. (250 aa) |
| | ttrC | Similar to Salmonella typhimurium tetrathionate reductase subunit C TtrC TR:Q9Z4S7 (EMBL:AJ224978) (340 aa) fasta scores: E(): 0, 98.2% id in 340 aa. (340 aa) |
| | ttrA | Similar to Salmonella typhimurium tetrathionate reductase subunit A TtrA TR:Q9Z4S6 (EMBL:AJ224978) (1020 aa) fasta scores: E(): 0, 99.7% id in 1020 aa and to Archaeoglobus fulgidus molybdopterin oxidoreductase, molybdopterin binding subunit, putative af0159 TR:O30078 (EMBL:AE001095) (1134 aa) fasta scores: E(): 6.4e-33, 31.1% id in 1000 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1020 aa) |
| | STY1744 | Pyruvate kinase; Fasta hit to KPY2_ECOLI (479 aa), 38% identity in 480 aa overlap; Orthologue of E. coli pykF (KPY1_ECOLI); Fasta hit to KPY1_ECOLI (470 aa), 96% identity in 470 aa overlap. (470 aa) |
| | ppsA | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (792 aa) |
| | STY1785 | 6-phosphofructokinase isozyme; Fasta hit to K1PF_ECOLI (312 aa), 31% identity in 311 aa overlap; Orthologue of E. coli pfkB (K6P2_ECOLI); Fasta hit to K6P2_ECOLI (309 aa), 93% identity in 308 aa overlap; Belongs to the carbohydrate kinase PfkB family. (310 aa) |
| | STY1815 | NADP-specific glutamate dehydrogenase; Catalyzes the reversible oxidative deamination of glutamate to alpha-ketoglutarate and ammonia. (447 aa) |
| | STY1825 | Glyceraldehyde 3-phosphate dehydrogenase A; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG. (331 aa) |
| | STY1902 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (418 aa) |
| | STY1906 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (315 aa) |
| | STY1914 | Hydrogenase-1 large chain (nifE hydrogenase); Fasta hit to MBHM_ECOLI (566 aa), 42% identity in 593 aa overlap; Orthlogue of E. coli hyaB (MBHL_ECOLI); Fasta hit to MBHL_ECOLI (597 aa), 91% identity in 597 aa overlap; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (597 aa) |
| | STY2093 | 6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (603 aa) |
| | STY2094 | Glucose 6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (491 aa) |
| | STY2096 | Pyruvate kinase A; Fasta hit to KPY1_ECOLI (470 aa), 37% identity in 480 aa overlap; Orthologue of E. coli pykA (KPY2_ECOLI); Fasta hit to KPY2_ECOLI (479 aa), 98% identity in 479 aa overlap; Belongs to the pyruvate kinase family. (480 aa) |
| | phsC | Similar to Salmonella typhimurium thiosulfate reductase cytochrome b subunit phsC SW:PHSC_SALTY (P37602; P37603; Q56120) (254 aa) fasta scores: E(): 0, 99.6% id in 254 aa; Orthologue of E. coli PHSC_ECOLI; Fasta hit to PHSC_ECOLI (261 aa), 57% identity in 242 aa overlap. Contains hydrophobic, probable membrane-spanning regions. (254 aa) |
| | phsB | Thiosulfate reductase electron transport protein PhsB; Component of the PhsABC thiosulfate reductase that catalyzes the reduction of thiosulfate to sulfite and hydrogen sulfide, with menaquinol as the sole electron donor. Proton motive force (PMF) is required to drive transmembrane electron transfer within the reductase. The PhsB subunit transfers electrons between PhsC and PhsA. (192 aa) |
| | phsA | Similar to Salmonella typhimurium thiosulfate reductase precursor phsA SW:PHSA_SALTY (P37600) (758 aa) fasta scores: E(): 0, 99.6% id in 758 aa. Contains a probable N-terminal signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (758 aa) |
| | STY2290 | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (468 aa) |
| | fbaB | Similar to Escherichia coli fructose-bisphosphate aldolase class I FbaB or DhnA SW:ALF1_ECOLI (P71295) (349 aa) fasta scores: E(): 0, 96.0% id in 349 aa; Orthologue of E. coli ALF1_ECOLI; Fasta hit to ALF1_ECOLI (349 aa), 96% identity in 349 aa overlap. (350 aa) |
| | STY2397 | D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family. (576 aa) |
| | STY2405 | Putative n-hydroxybenzoate hydroxylase; Similar to hydroxylases/monooxygenases e.g. Pseudomonas stutzeri salicylate hydroxylase nahW TR:Q9ZI64 (EMBL:AF039534) (389 aa) fasta scores: E(): 9.9e-29, 28.9% id in 387 aa overlap. Similar to Bordetella pertussis hypothetical protein TR:O30447 (EMBL:AF006000) (406 aa) fasta scores: E(): 0, 33.2% id in 398 aa. May produce gentisate, given presence of putative gentisate 1,2-dioxygenase upstream. (397 aa) |
| | STY2406 | glutathione-S-transferase-family protein; Similar to e.g. Pseudomonas sp. U2 glutathione-S-transferase homolog from plasmid pWWU2 nagL TR:O86043 (EMBL:AF081362) (212 aa) fasta scores: E(): 2.4e-28, 42.1% id in 214 aa and Homo sapiens maleylacetoacetate isomerase gstz1 or maaI SW:MAAI_HUMAN (O43708; O15308; O75430) (216 aa) fasta scores: E(): 1.7e-24, 40.8% id in 211 aa. May be maleylpyruvate isomerase, given the presence of a putative gentisate 1,2-dioxygenase upstream. (214 aa) |
| | STY2407 | FAA-hydrolase-family protein; Similar to Pseudomonas sp. U2 putative isomerase-decarboxylase homolog from plasmid pWWU2 nagK TR:O86042 (EMBL:AF081362) (192 aa) fasta scores: E(): 2.7e-30, 46.9% id in 196 aa. May be fumarylpyruvate hydrolase, given the presence of putative gentisate 1,2-dioxygenase and putative maleylpyruvate isomerase in this gene cassette; Paralogue of E. coli P76004; Fasta hit to P76004 (219 aa), 39% identity in 208 aa overlap. (233 aa) |
| | STY2408 | Putative gentisate 1,2-dioxygenase; Similar to several e.g. Pseudomonas alcaligenes gentisate 1,2-dioxygenase xlnE TR:Q9S3U6 (EMBL:AF173167) (347 aa) fasta scores: E(): 0, 53.3% id in 338 aa. (345 aa) |
| | STY2428 | Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde. (285 aa) |
| | STY2439 | PTS system, fructose-specific IIBC component; Fasta hit to PTVB_ECOLI (485 aa), 34% identity in 478 aa overlap; Orthologue of E. coli fruA (PTFB_ECOLI); Fasta hit to PTFB_ECOLI (563 aa), 94% identity in 507 aa overlap. (562 aa) |
| | STY2482 | Cytochrome c-type protein NapB precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (149 aa) |
| | STY2485 | Probable nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa) |
| | STY2519 | Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Catalyzes the reversible retro-aldol cleavage of 2-keto-3- deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde. Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily. (267 aa) |
| | STY2521 | Putative MR-MLE-family protein; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR). (405 aa) |
| | STY2567 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa) |
| | STY2568 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (714 aa) |
| | STY2570 | Similar to the C-terminal halves of transketolases e.g. Mus musculus transketolase tkt SW:TKT_MOUSE (P40142) (623 aa) fasta scores: E(): 4e-27, 33.1% id in 311 aa and Escherichia coli 1-deoxyxylulose-5-phosphate synthase dxs SW:DXS_ECOLI (P77488) (619 aa) fasta scores: E(): 4e-19, 27.6% id in 308 aa. (317 aa) |
| | STY2571 | Similar to the N-terminal halves of transketolases e.g. Mus musculus transketolase tkt SW:TKT_MOUSE (P40142) (623 aa) fasta scores: E(): 5.6e-24, 33.0% id in 267 aa. (276 aa) |
| | STY2572 | Putative membrane protein; Similar to Streptomyces coelicolor putative integral membrane protein SCJ21.17C TR:Q9S1Z0 (EMBL:AL109747) (516 aa) fasta scores: E(): 0, 47.3% id in 457 aa and Escherichia coli putative transport protein SgaT sgaT SW:SGAT_ECOLI (P39301) (484 aa) fasta scores: E(): 0, 27.6% id in 460 aa. Contains hydrophobic, probable membrane-spanning regions. (463 aa) |
| | STY2573 | Similar to Escherichia coli unknown pentitol phosphotransferase enzyme II, B component sgaB SW:PTXB_ECOLI (P39302) (101 aa) fasta scores: E(): 0.0058, 28.7% id in 87 aa, and to the C-termini of pts system proteins e.g. Escherichia coli pts system, mannitol cmtA SW:PTYC_ECOLI (P32059) (462 aa) fasta scores: E(): 0.061, 30.9% id in 81 aa. (90 aa) |
| | STY2574 | Putative sugar phosphotransferase component II A; Fasta hit to PTYA_ECOLI (147 aa), 41% identity in 146 aa overlap; Paralogue of E. coli ptxA (PTXA_ECOLI); Fasta hit to PTXA_ECOLI (154 aa), 40% identity in 140 aa overlap. (147 aa) |
| | STY2586 | Putative decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN. (189 aa) |
| | STY2597 | acetyl-CoA carboxylase beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (304 aa) |
| | STY2620 | Putative fatty acid oxidation complex alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa) |
| | STY2621 | Putative 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (436 aa) |
| | STY2644 | Glucokinase; Orthologue of E. coli glk (HXKG_ECOLI); Fasta hit to HXKG_ECOLI (321 aa), 94% identity in 321 aa overlap; Belongs to the bacterial glucokinase family. (321 aa) |
| | STY2654 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (474 aa) |
| | STY2666 | Cysteine synthase A; Two cysteine synthase enzymes are found. Both catalyze the same reaction. Cysteine synthase B can also use thiosulfate in place of sulfide to give cysteine thiosulfonate as a product (By similarity). (323 aa) |
| | eutG | Putative alchohol dehydrogenase; Similar to Escherichia coli ethanolamine utilization protein EutG eutG SW:EUTG_ECOLI (P76553) (395 aa) fasta scores: E(): 0, 86.0% id in 394 aa and Salmonella typhimurium ethanolamine utilization protein EutG eutG SW:EUTG_SALTY (P41795) (391 aa) fasta scores: E(): 0, 93.4% id in 395 aa. (395 aa) |
| | STY2700 | Putative aldehyde dehydrogenase; Similar to Salmonella typhimurium ethanolamine utilization protein EutE eutE SW:EUTE_SALTY (P41793) (467 aa) fasta scores: E(): 0, 99.4% id in 467 aa; Orthologue of E. coli eutE (EUTE_ECOLI); Fasta hit to EUTE_ECOLI (467 aa), 94% identity in 467 aa overlap. (467 aa) |
| | maeB | NADP-dependent malate dehydrogenase (decarboxylating); Similar to Escherichia coli NADP-dependent malic enzyme maeB SW:MAO2_ECOLI (P76558) (759 aa) fasta scores: E(): 0, 94.3% id in 759 aa; Orthologue of E. coli MAO2_ECOLI; Fasta hit to MAO2_ECOLI (759 aa), 94% identity in 759 aa overlap. (759 aa) |
| | STY2710 | Transaldolase A; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa) |
| | STY2711 | Transketolase 2; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (666 aa) |
| | STY2721 | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (375 aa) |
| | STY2727 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (292 aa) |
| | STY2730 | Similar to Bacillus subtilis hypothetical protein yxaA SW:YXAA_BACSU (P42100) (382 aa) fasta scores: E(): 0, 58.2% id in 378 aa and Haemophilus influenzae hypothetical protein HI0091 SW:YHAD_HAEIN (P44507) (378 aa) fasta scores: E(): 0, 58.9% id in 372 aa; Fasta hit to YBBZ_ECOLI (381 aa), 55% identity in 377 aa overlap; Paralogue of E. coli yhaD (YHAD_ECOLI); Fasta hit to YHAD_ECOLI (381 aa), 60% identity in 371 aa overlap; Belongs to the glycerate kinase type-1 family. (379 aa) |
| | STY2779 | Putative thiosulfate sulfurtransferase; Similar to many eukaryotic proteins e.g. Homo sapiens 3-mercaptopyruvate sulfurtransferase mpsT or tst2 SW:THTM_HUMAN (P25325) (296 aa) fasta scores: E(): 0, 41.1% id in 280 aa; Orthologue of E. coli sseA (THTR_ECOLI); Fasta hit to THTR_ECOLI (280 aa), 81% identity in 278 aa overlap. (280 aa) |
| | asrA | Similar to Salmonella typhimurium anaerobic sulfite reductase subunit A asrA SW:ASRA_SALTY (P26474) (347 aa) fasta scores: E(): 0, 99.1% id in 347 aa. (347 aa) |
| | asrB | Similar to Salmonella typhimurium anaerobic sulfite reductase subunit B SW:ASRB_SALTY (P26475) (272 aa) fasta scores: E(): 0, 99.3% id in 272 aa. (272 aa) |
| | asrC | Anaerobic sulfite reductase subunit C; This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine (By similarity). (337 aa) |
| | STY2802 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (417 aa) |
| | STY2806 | Similar to Salmonella typhimurium lysine decarboxylase, inducible SW:DCLY_SALTY (Q60002) (715 aa) fasta scores: E(): 0, 97.5% id in 715 aa; Fasta hit to DCOS_ECOLI (732 aa), 33% identity in 623 aa overlap; Fasta hit to ADI_ECOLI (755 aa), 36% identity in 740 aa overlap; Fasta hit to DCLZ_ECOLI (713 aa), 70% identity in 710 aa overlap; Fasta hit to DCOR_ECOLI (731 aa), 34% identity in 616 aa overlap; Orthologue of E. coli cadA (DCLY_ECOLI); Fasta hit to DCLY_ECOLI (715 aa), 92% identity in 714 aa overlap; Belongs to the Orn/Lys/Arg decarboxylase class-I family. (714 aa) |
| | STY2909 | Gab protein homolog; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (328 aa) |
| | STY2910 | Putative GAB DTP gene cluster repressor; Catalyzes the dehydrogenation of L-2-hydroxyglutarate (L2HG) to alpha-ketoglutarate and couples to the respiratory chain by feeding electrons from the reaction into the membrane quinone pool. Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. Reaction=(S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol; Xref=Rhea:RHEA:58664, ChEBI:CHEBI:16782, ChEBI:CHEBI:16810, ChEBI:CHEBI:24646, ChEBI:CHEBI:132124; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:58665; Belongs to the L2 [...] (422 aa) |
| | STY2911 | Succinate-semialdehyde dehydrogenase; Fasta hit to ALDA_ECOLI (478 aa), 39% identity in 464 aa overlap; Fasta hit to FEAB_ECOLI (499 aa), 36% identity in 480 aa overlap; Fasta hit to YNEI_ECOLI (462 aa), 32% identity in 445 aa overlap; Fasta hit to ALDB_ECOLI (512 aa), 33% identity in 490 aa overlap; Fasta hit to DHAB_ECOLI (489 aa), 37% identity in 481 aa overlap; Fasta hit to DHAL_ECOLI (495 aa), 34% identity in 485 aa overlap; Fasta hit to ASTD_ECOLI (492 aa), 32% identity in 470 aa overlap; Fasta hit to YDCW_ECOLI (474 aa), 37% identity in 477 aa overlap; Orthologue of E. coli gabD [...] (482 aa) |
| | STY2912 | 4-aminobutyrate aminotransferase; Fasta hit to GSA_ECOLI (426 aa), 32% identity in 421 aa overlap; Fasta hit to ARGM_ECOLI (406 aa), 34% identity in 404 aa overlap; Fasta hit to ARGD_ECOLI (405 aa), 36% identity in 411 aa overlap; Fasta hit to BIOA_ECOLI (429 aa), 32% identity in 353 aa overlap; Fasta hit to GOAG_ECOLI (421 aa), 53% identity in 421 aa overlap; Orthologue of E. coli gabT (GABT_ECOLI); Fasta hit to GABT_ECOLI (426 aa), 89% identity in 426 aa overlap; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (427 aa) |
| | STY3046 | Possible decarboxylase; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. (197 aa) |
| | STY3047 | Conserved hypothetical protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. (475 aa) |
| | STY3048 | Similar to Streptomyces sp. D7 hypothetical protein VdcD which is encoded by a gene within the vanillic acid decarboxylation cluster TR:Q9X698 (EMBL:AF134589) (79 aa) fasta scores: E(): 3.4e-17, 60.6% id in 71 aa. (78 aa) |
| | cysC | Adenosine 5-phosphosulfate kinase; Catalyzes the synthesis of activated sulfate. (201 aa) |
| | cysN | ATP sulfurylase (ATP:sulfate adenyltransferase) subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (479 aa) |
| | cysD | ATP sulfurylase (ATP:sulfate adenyltransferase); Orthologue of E. coli cysD (CYSD_ECOLI); Fasta hit to CYSD_ECOLI (302 aa), 97% identity in 302 aa overlap. (302 aa) |
| | STY3074 | 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; Reduction of activated sulfate into sulfite. (244 aa) |
| | STY3075 | Sulfite reductase (NADPH) hemoprotein alpha subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (570 aa) |
| | STY3076 | Sulfite reductase (NADPH) flavoprotein beta subunit; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (599 aa) |
| | STY3081 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (432 aa) |
| | STY3097 | Conserved hypothetical protein; Fasta hit to YBBZ_ECOLI (381 aa), 58% identity in 380 aa overlap; Paralogue of E. coli yhaD (YHAD_ECOLI); Fasta hit to YHAD_ECOLI (381 aa), 69% identity in 378 aa overlap; Belongs to the glycerate kinase type-1 family. (380 aa) |
| | STY3112 | 1,2-propanediol oxidoreductase (lactaldehyde reductase); Fasta hit to EUTG_ECOLI (395 aa), 40% identity in 372 aa overlap; Fasta hit to ADH2_ECOLI (383 aa), 44% identity in 371 aa overlap; Orthologue of E. coli fucO (FUCO_ECOLI); Fasta hit to FUCO_ECOLI (383 aa), 91% identity in 382 aa overlap. (382 aa) |
| | STY3113 | Fuculose-1-phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. (215 aa) |
| | STY3116 | L-fuculose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (576 aa) |
| | STY3117 | L-fuculose kinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family. (472 aa) |
| | STY3157 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (420 aa) |
| | yqeF | Similar to Escherichia coli probable acetyl-CoA acetyltransferase YqeF SW:YQEF_ECOLI (Q46939) (393 aa) fasta scores: E(): 0, 91.5% id in 388 aa; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa) |
| | STY3218 | D-3-phosphoglycerate dehydrogenase; Orthologue of E. coli serA (SERA_ECOLI); Fasta hit to SERA_ECOLI (409 aa), 96% identity in 409 aa overlap; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (410 aa) |
| | STY3219 | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (219 aa) |
| | STY3226 | Fructose 1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (359 aa) |
| | STY3227 | Phosphoglycerate kinase; Orthologue of E. coli pgk (PGK_ECOLI); Fasta hit to PGK_ECOLI (386 aa), 98% identity in 386 aa overlap; Belongs to the phosphoglycerate kinase family. (387 aa) |
| | STY3236 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa) |
| | STY3298 | Similar to Escherichia coli phenylacetaldehyde dehydrogenase feaB SW:FEAB_ECOLI (P80668; P46884; P77637; O32557) (499 aa) fasta scores: E(): 0, 43.8% id in 495 aa. (494 aa) |
| | STY3318 | Hydrogenase-2 large subunit; Fasta hit to MBHL_ECOLI (597 aa), 43% identity in 595 aa overlap; Orthologue of E. coli hybC (MBHM_ECOLI); Fasta hit to MBHM_ECOLI (566 aa), 94% identity in 566 aa overlap; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (567 aa) |
| | hyb0 | Similar to Escherichia coli hydrogenase-2 small chain precursor Hyb0 SW:MBHT_ECOLI (Q46847) (372 aa) fasta scores: E(): 0, 96.8% id in 372 aa. Contains multiple possible membrane spanning hydrophobic domains. (372 aa) |
| | STY3396 | Probable aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (429 aa) |
| | tdcE | Probable formate acetyltransferase; Fasta hit to PFLB_ECOLI (759 aa), 79% identity in 752 aa overlap; Orthologue of E. coli yhaS (TDCE_ECOLI); Fasta hit to TDCE_ECOLI (746 aa), 93% identity in 741 aa overlap. (764 aa) |
| | STY3429 | Conserved hypothetical protein; Fasta hit to YBBZ_ECOLI (381 aa), 56% identity in 376 aa overlap; Orthologue of E. coli yhaD (YHAD_ECOLI); Fasta hit to YHAD_ECOLI (381 aa), 86% identity in 381 aa overlap; Belongs to the glycerate kinase type-1 family. (381 aa) |
| | STY3436 | Possible carbohydrate kinase; Similar to Bacillus subtilis 1-phosphofructokinase fruk or fruB SW:K1PF_BACSU (O31714) (303 aa) fasta scores: E(): 9.9e-28, 31.8% id in 305 aa; Belongs to the carbohydrate kinase PfkB family. (304 aa) |
| | STY3437 | Similar to Escherichia coli PTS system, fructose-like-1 IIBC component FrvB SW:PTVB_ECOLI (P32154) (485 aa) fasta scores: E(): 0, 32.4% id in 475 aa. Note, like the example given, the predicted product of this CDS contains only one hydrophilic IIB domain. Contains possible membrane spanning hydrophobic domains; Fasta hit to PTVB_ECOLI (485 aa), 32% identity in 474 aa overlap; Paralogue of E. coli fruA (PTFB_ECOLI); Fasta hit to PTFB_ECOLI (563 aa), 42% identity in 471 aa overlap. (475 aa) |
| | STY3510 | Similar to Escherichia coli glutamate synthase [NADPH] large chain precursor GltB SW:GLTB_ECOLI (P09831) (1517 aa) fasta scores: E(): 0, 95.4% id in 1486 aa and to Pseudomonas aeruginosa glutamate synthase large subunit GltB TR:P95456 (EMBL:U81261) (1482 aa) fasta scores: E(): 0, 60.9% id in 1476 aa. (1486 aa) |
| | STY3511 | Glutamate synthase (NADPH) small chain; Fasta hit to P76440 (412 aa), 33% identity in 443 aa overlap; Orthologue of E. coli gltD (GLTD_ECOLI); Fasta hit to GLTD_ECOLI (471 aa), 95% identity in 471 aa overlap. (472 aa) |
| | oadB-2 | Oxaloacetate decarboxylase beta chain; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation. (433 aa) |
| | STY3539 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (312 aa) |
| | STY3559 | Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (156 aa) |
| | STY3560 | Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa) |
| | STY3577 | Large (alpha) subunit of the fatty acid-oxidizing multienzyme complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (729 aa) |
| | STY3578 | Small (beta) subunit of the fatty acid-oxidizing multienzyme complex; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. Involved in the aerobic and anaerobic degradation of long-chain fatty acids (By similarity). (387 aa) |
| | STY3592 | Similar to Escherichia coli putative carboxymethylenebutenolidase YsgA SW:DLHH_ECOLI (P56262) (258 aa) fasta scores: E(): 0, 90.6% id in 255 aa; Orthologue of E. coli DLHH_ECOLI; Fasta hit to DLHH_ECOLI (258 aa), 91% identity in 255 aa overlap. (270 aa) |
| | STY3612 | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (274 aa) |
| | STY3621 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (313 aa) |
| | STY3622 | Uroporphyrinogen III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (246 aa) |
| | STY3623 | Uroporphyrinogen III methylase; Orthologue of E. coli hemX (HEMX_ECOLI); Fasta hit to HEMX_ECOLI (393 aa), 88% identity in 393 aa overlap. (389 aa) |
| | STY3754 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (883 aa) |
| | STY3761 | 5,10 methylenetetrahydrofolate reductase; Orthologue of E. coli metF (METF_ECOLI); Fasta hit to METF_ECOLI (296 aa), 96% identity in 296 aa overlap; Belongs to the methylenetetrahydrofolate reductase family. (296 aa) |
| | STY3764 | Putative serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (419 aa) |
| | STY3768 | Bifunctional aspartokinase II/homoserine dehydrogenase IIcan I write; Fasta hit to AK1H_ECOLI (820 aa), 30% identity in 823 aa overlap; Orthologue of E. coli metL (AK2H_ECOLI); Fasta hit to AK2H_ECOLI (809 aa), 94% identity in 809 aa overlap; In the C-terminal section; belongs to the homoserine dehydrogenase family. (810 aa) |
| | STY3785 | Putative glycerol metabolic protein; Fasta hit to YGGF_ECOLI (321 aa), 57% identity in 318 aa overlap; Orthologue of E. coli glpX thought to be involved with glycerol metabolism (GLPX_ECOLI); Fasta hit to GLPX_ECOLI (336 aa), 95% identity in 336 aa overlap. (366 aa) |
| | STY3789 | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (255 aa) |
| | STY3790 | Similar to several Prokaryotic and Eukaryotic ribulose-phosphate 3-epimerases e.g. Bacillus subtilis RpE SW:RPE_BACSU (O34557) (217 aa) fasta scores: E(): 9.4e-16, 30.3% id in 208 aa and to Oryza sativa SW:RPE_ORYSA (Q9ZTP5) (274 aa) fasta scores: E(): 2.7e-13, 29.8% id in 208 aa. (254 aa) |
| | STY3809 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (320 aa) |
| | STY3826 | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. (489 aa) |
| | STY3827 | L-rhamnose isomerase; Orthologue of E. coli rhaA (RHAA_ECOLI); Fasta hit to RHAA_ECOLI (419 aa), 94% identity in 418 aa overlap. (419 aa) |
| | STY3830 | Similar to several alcohol dehydrogenases e.g. Bacillus methanolicus NAD-dependent methanol dehydrogenase MdH SW:MEDH_BACMT (P31005) (380 aa) fasta scores: E(): 0, 44.4% id in 378 aa; Fasta hit to EUTG_ECOLI (395 aa), 40% identity in 377 aa overlap; Fasta hit to FUCO_ECOLI (383 aa), 43% identity in 383 aa overlap. (382 aa) |
| | fdoG | Highly similar to Escherichia coli formate dehydrogenase-O, major subunit fdoG SW:FDOG_ECOLI (P32176; P78131) (1016 aa). Contains a stop codon (codon 196) which is encoded as a selenocysteine by the opal codon UGA. (1016 aa) |
| | STY3841 | Formate dehydrogenase-O beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (300 aa) |
| | STY3842 | Formate dehydrogenase-O gamma subunit; Fasta hit to FDNI_ECOLI (217 aa), 49% identity in 214 aa overlap; Orthologue of E. coli fdoI (FDOI_ECOLI); Fasta hit to FDOI_ECOLI (211 aa), 96% identity in 211 aa overlap. (211 aa) |
| | STY3852 | Putative haloacid dehalogenase-like hydrolase; Orthologue of E. coli yihX (YIHX_ECOLI); Fasta hit to YIHX_ECOLI (199 aa), 89% identity in 199 aa overlap. (199 aa) |
| | STY3874 | Glutamine synthetase; Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia; Belongs to the glutamine synthetase family. (469 aa) |
| | STY3925 | Similar to Escherichia coli PTS system, fructose-specific IIBC component SW:PTFB_ECOLI () (563 aa) fasta scores: E(): 0, 65.5% id in 458 aa. Note the product of this CDS lacks the first of the two E. coli EIIB transferase domains; Fasta hit to PTVB_ECOLI (485 aa), 35% identity in 450 aa overlap; Paralogue of E. coli fruA (PTFB_ECOLI); Fasta hit to PTFB_ECOLI (563 aa), 66% identity in 458 aa overlap. (457 aa) |
| | STY3956 | trimethylamine-N-oxide reductase precursor; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. (850 aa) |
| | STY3957 | TorD protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily. (210 aa) |
| | STY4013 | Similar to Escherichia coli PTS system, mannose-specific IIAB component SW:PTNA_ECOLI (P08186) (322 aa) fasta scores: E(): 0.0015, 35.0% id in 123 aa, and to Streptococcus salivarius mannose-specific phosphotransferase system component IIAB TR:Q9S4L5 (EMBL:AF130465) (330 aa) fasta scores: E(): 0.0035, 25.2% id in 103 aa. (141 aa) |
| | STY4014 | Similar to Bacillus subtilis PTS system, fructose-specific IIB component SW:PTFB_BACSU (P26380) (163 aa) fasta scores: E(): 6.6e-15, 30.2% id in 159 aa, and to Streptococcus salivarius mannose-specific phosphotransferase system component IIB TR:Q9S4L5 (EMBL:AF130465) (330 aa) fasta scores: E(): 1.6e-14, 31.8% id in 157 aa, and to Escherichia coli PTS system, mannose-specific IIAB component manX or ptsl or gptB SW:PTNA_ECOLI (P08186) (322 aa) fasta scores: E(): 3.5e-13, 29.9% id in 157 aa. (161 aa) |
| | STY4015 | Putative PTS system protein; Orthologue of E. coli agaC (PTPC_ECOLI); Fasta hit to PTPC_ECOLI (267 aa), 30% identity in 238 aa overlap. (249 aa) |
| | STY4016 | Similar to Escherichia coli PTS system, mannose-specific IID component SW:PTND_ECOLI (P08188) (286 aa) fasta scores: E(): 0, 39.9% id in 273 aa, and to Klebsiella pneumoniae PTS system, sorbose-specific IID component sorM SW:PTRD_KLEPN (P37083) (274 aa) fasta scores: E(): 3.2e-29, 34.8% id in 276 aa. (285 aa) |
| | STY4017 | Putative transferase; Weakly similar to Aquifex aeolicus L-seryl-tRNA selA TR:O67140 (EMBL:AE000719) (452 aa) fasta scores: E(): 0.37, 24.6% id in 403 aa, and to Azotobacter vinelandii dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex SW:ODO2_AZOVI (P20708) (398 aa) fasta scores: E(): 0.91, 23.2% id in 285 aa. (369 aa) |
| | STY4018 | Conserved hypothetical protein; Some similarity to Arabidopsis thaliana putative D-ribulose-5-phosphate 3-epimerase f28j7.18 TR:Q9SGI6 (EMBL:AC010797) (233 aa) fasta scores: E(): 1.1, 24.3% id in 243 aa, and to Haloferax sp predicted 2-dehydro-3-deoxyphosphogluconate aldolase TR:P94802 (EMBL:U70664) (215 aa) fasta scores: E(): 4.8, 29.2% id in 144 aa. (247 aa) |
| | STY4091 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (507 aa) |
| | cysE | Similar to Escherichia coli serine acetyltransferase cysE SW:CYSE_ECOLI (P05796) (273 aa) fasta scores: E(): 0, 95.6% id in 273 aa; Belongs to the transferase hexapeptide repeat family. (273 aa) |
| | STY4116 | Aldehyde dehydrogenase B; Fasta hit to ALDA_ECOLI (478 aa), 33% identity in 478 aa overlap; Fasta hit to FEAB_ECOLI (499 aa), 34% identity in 481 aa overlap; Fasta hit to YNEI_ECOLI (462 aa), 31% identity in 465 aa overlap; Fasta hit to DHAB_ECOLI (489 aa), 38% identity in 478 aa overlap; Fasta hit to DHAL_ECOLI (495 aa), 40% identity in 481 aa overlap; Fasta hit to YDCW_ECOLI (474 aa), 35% identity in 481 aa overlap; Fasta hit to GABD_ECOLI (482 aa), 34% identity in 485 aa overlap; Orthologue of E. coli aldB (ALDB_ECOLI); Fasta hit to ALDB_ECOLI (512 aa), 96% identity in 512 aa overla [...] (512 aa) |
| | STY4119 | Putative sugar isomerase; Similar to Salmonella typhimurium L-ribulose-5-phosphate 4-epimerase araD SW:ARAD_SALTY (P06190) (231 aa) fasta scores: E(): 0, 76.2% id in 231 aa; Fasta hit to SGAE_ECOLI (228 aa), 63% identity in 230 aa overlap; Fasta hit to ARAD_ECOLI (231 aa), 77% identity in 231 aa overlap; Orthologue of E. coli yiaS (SGBE_ECOLI); Fasta hit to SGBE_ECOLI (231 aa), 93% identity in 231 aa overlap. (231 aa) |
| | STY4120 | Putative sugar-phosphate isomerase; Fasta hit to SGAU_ECOLI (284 aa), 59% identity in 279 aa overlap; Orthologue of E. coli yiaR (SGBU_ECOLI); Fasta hit to SGBU_ECOLI (286 aa), 91% identity in 286 aa overlap. (286 aa) |
| | STY4121 | Similar to Methylomonas aminofaciens hexulose-6-phosphate synthase hps SW:HUMS_METAM (Q48907) (208 aa) fasta scores: E(): 5.9e-17, 34.6% id in 205 aa; Fasta hit to SGAH_ECOLI (216 aa), 45% identity in 216 aa overlap; Orthologue of E. coli yiaQ (SGBH_ECOLI); Fasta hit to SGBH_ECOLI (220 aa), 90% identity in 220 aa overlap. (220 aa) |
| | STY4156 | Putative 2-hydroxyacid dehydrogenase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily. (324 aa) |
| | STY4191 | 2-dehydro-3-deoxygluconokinase; Orthologue of E. coli kdgK (KDGK_ECOLI); Fasta hit to KDGK_ECOLI (309 aa), 92% identity in 308 aa overlap. (309 aa) |
| | gntK | Putative gluconokinase; Similar to Escherichia coli thermoresistant gluconokinase GntK SW:GNTK_ECOLI (P46859) (175 aa) fasta scores: E(): 0, 96.0% id in 174 aa and to Escherichia coli thermosensitive gluconokinase IdnK SW:IDNK_ECOLI (P39208) (187 aa) fasta scores: E(): 5.6e-32, 49.7% id in 153 aa. (177 aa) |
| | STY4271 | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (368 aa) |
| | glpE | Conserved hypothetical protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. (108 aa) |
| | STY4296 | Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (539 aa) |
| | rpe | Similar to Escherichia coli ribulose-phosphate 3-epimerase rpe or doD SW:RPE_ECOLI (P32661) (225 aa) fasta scores: E(): 0, 97.3% id in 225 aa, and to Serratia marcescens ribulose-phosphate 3-epimerase rpe or doD SW:RPE_SERMA (P45455) (210 aa) fasta scores: E(): 0, 87.1% id in 210 aa. (225 aa) |
| | cysG | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. (457 aa) |
| | nirD | Nitrite reductase (NAD(P)H) small subunit; Required for activity of the reductase. (108 aa) |
| | nirB | Similar to Escherichia coli nitrite reductase [NAD nirB SW:NIRB_ECOLI (P08201) (847 aa) fasta scores: E(): 0, 95.0% id in 847 aa; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa) |
| | argD | Acetylornithine aminotransferase; Involved in both the arginine and lysine biosynthetic pathways. (405 aa) |
| | prkB | Phosphoribulokinase; Similar to Escherichia coli probable phosphoribulokinase prkB SW:KPPR_ECOLI (P37307) (289 aa) fasta scores: E(): 0, 97.2% id in 289 aa, and to Alcaligenes eutrophus phosphoribulokinase, plasmid cfxP SW:KPPP_ALCEU (P19924) (291 aa) fasta scores: E(): 0, 57.1% id in 287 aa. (289 aa) |
| | STY4401 | Similar to Escherichia coli malate synthase A AceB SW:MASY_ECOLI (P08997) (533 aa) fasta scores: E(): 0, 90.8% id in 533 aa, and to Myxococcus xanthus malate synthase mls SW:MASY_MYXXA (P95329) (541 aa) fasta scores: E(): 0, 56.2% id in 511 aa. (533 aa) |
| | STY4402 | Isocitrate lyase; Similar to Escherichia coli isocitrate lyase AceA SW:ACEA_ECOLI (P05313) (434 aa) fasta scores: E(): 0, 95.6% id in 434 aa, and to Vibrio cholerae isocitrate lyase VC0736 TR:Q9KTZ4 (EMBL:AE004159) (437 aa) fasta scores: E(): 0, 79.4% id in 433 aa. (434 aa) |
| | STY4416 | Similar to Escherichia coli lysine-sensitive aspartokinase III LysC SW:AK3_ECOLI (P08660) (449 aa) fasta scores: E(): 0, 93.3% id in 449 aa; Belongs to the aspartokinase family. (449 aa) |
| | STY4417 | Similar to Escherichia coli glucose-6-phosphate isomerase pgi SW:G6PI_ECOLI (P11537) (549 aa) fasta scores: E(): 0, 95.3% id in 548 aa, and to Haemophilus influenzae glucose-6-phosphate isomerase pgi SW:G6PI_HAEIN (P44312) (563 aa) fasta scores: E(): 0, 75.4% id in 549 aa; Belongs to the GPI family. (549 aa) |
| | acs | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (652 aa) |
| | STY4475 | Cytochrome c552 precursor; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (478 aa) |
| | fumB | Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (548 aa) |
| | frdD | Fumarate reductase complex subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (119 aa) |
| | frdC | Fumarate reductase complex subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa) |
| | frdB | Similar to Escherichia coli fumarate reductase iron-sulfur protein frdB SW:FRDB_ECOLI (P00364) (243 aa) fasta scores: E(): 0, 95.5% id in 243 aa, and to Proteus vulgaris fumarate reductase iron-sulfur protein frdB SW:FRDB_PROVU (P20921) (244 aa) fasta scores: E(): 0, 83.5% id in 242 aa; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (244 aa) |
| | frdA | Similar to Escherichia coli fumarate reductase flavoprotein subunit SW:FRDA_ECOLI (P00363) (601 aa) fasta scores: E(): 0, 95.3% id in 594 aa, and to Proteus vulgaris fumarate reductase flavoprotein subunit frdA SW:FRDA_PROVU (P20922) (598 aa) fasta scores: E(): 0, 85.5% id in 598 aa. (596 aa) |
| | yjfR | Conserved hypothetical protein; Probably catalyzes the hydrolysis of L-ascorbate-6-P into 3- keto-L-gulonate-6-P. Is essential for L-ascorbate utilization under anaerobic conditions; Belongs to the UlaG family. (354 aa) |
| | sgaT | Putative transport protein SgaT; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II UlaABC PTS system is involved in ascorbate transport. (476 aa) |
| | sgaB | Putative PTS system IIB protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II UlaABC PTS system is involved in ascorbate transport. (101 aa) |
| | sgaA | Probable sugar phosphotransferase; The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. The enzyme II UlaABC PTS system is involved in ascorbate transport. (154 aa) |
| | sgaH | Putative hexulose-6-phosphate synthase; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily. (216 aa) |
| | sgaU | Conserved hypothetical protein; Catalyzes the isomerization of L-xylulose-5-phosphate to L- ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization; Belongs to the L-ribulose-5-phosphate 3-epimerase family. (284 aa) |
| | sgaE | Probable class II aldolase; Catalyzes the isomerization of L-ribulose 5-phosphate to D- xylulose 5-phosphate. Is involved in the anaerobic L-ascorbate utilization. (228 aa) |
| | cysQ | cysQ protein; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. (246 aa) |
| | fbp | Fructose-1,6-bisphosphatase; Similar to Escherichia coli fructose-1,6-bisphosphatase fbp or fdP SW:F16P_ECOLI (P09200) (332 aa) fasta scores: E(): 0, 97.0% id in 332 aa, and to Haemophilus influenzae fructose-1,6-bisphosphatase fbp or hi1645 SW:F16P_HAEIN (P45292) (333 aa) fasta scores: E(): 0, 69.1% id in 333 aa. (332 aa) |
| | STY4804 | Carbamate kinase; Similar to Pseudomonas aeruginosa carbamate kinase SW:ARCC_PSEAE (P13982) (310 aa) fasta scores: E(): 0, 54.6% id in 306 aa, and to Synechocystis sp carbamate kinase SW:ARCC_SYNY3 (P74733) (308 aa) fasta scores: E(): 0, 53.5% id in 301 aa. (310 aa) |
| | serB | Similar to Escherichia coli phosphoserine phosphatase SerB SW:SERB_ECOLI (P06862) (322 aa) fasta scores: E(): 0, 93.5% id in 322 aa, and to Haemophilus influenzae phosphoserine phosphatase SerB SW:SERB_HAEIN (P44997) (314 aa) fasta scores: E(): 0, 51.5% id in 303 aa. (322 aa) |
| | gpmB | Similar to Escherichia coli probable phosphoglycerate mutase 2 gpmB SW:PMG2_ECOLI (P36942) (215 aa) fasta scores: E(): 0, 90.2% id in 215 aa. (215 aa) |
