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potG2 potG2 PFL_0030 PFL_0030 znuB znuB PFL_0100 PFL_0100 cysA cysA PFL_0231 PFL_0231 PFL_0232 PFL_0232 PFL_0247 PFL_0247 PFL_0340 PFL_0340 PFL_0341 PFL_0341 hisX hisX hisW hisW PFL_0416 PFL_0416 opuCA opuCA opuCB opuCB opuCC opuCC opuCB2 opuCB2 dppA1 dppA1 dppA2 dppA2 dppA3 dppA3 lptB lptB ttg2B ttg2B aapQ aapQ aapM aapM PFL_1067 PFL_1067 PFL_1068 PFL_1068 hisM hisM hisQ hisQ PFL_1710 PFL_1710 PFL_1772 PFL_1772 PFL_1773 PFL_1773 PFL_2031 PFL_2031 PFL_2032 PFL_2032 PFL_2196 PFL_2196 PFL_2197 PFL_2197 pedC pedC pedB pedB PFL_2283 PFL_2283 PFL_2358 PFL_2358 PFL_2359 PFL_2359 PFL_2554 PFL_2554 PFL_2603 PFL_2603 PFL_2723 PFL_2723 pltJ pltJ pltK pltK pltN pltN PFL_2921 PFL_2921 fbpC fbpC PFL_3059 PFL_3059 PFL_3060 PFL_3060 mtlK mtlK PFL_3164 PFL_3164 PFL_3301 PFL_3301 PFL_3302 PFL_3302 PFL_3549 PFL_3549 PFL_3550 PFL_3550 PFL_3570 PFL_3570 PFL_4024 PFL_4024 PFL_4028 PFL_4028 pvdE pvdE PFL_4174 PFL_4174 PFL_4175 PFL_4175 PFL_4391 PFL_4391 aotM aotM aotQ aotQ PFL_4614 PFL_4614 PFL_4864 PFL_4864 gltJ gltJ gltK gltK PFL_5022 PFL_5022 PFL_5023 PFL_5023 potA potA PFL_5495 PFL_5495 prbA prbA potA-2 potA-2 PFL_5752 PFL_5752 choX choX choW choW PFL_5890 PFL_5890 potG potG PFL_5974 PFL_5974 PFL_5975 PFL_5975 PFL_6050 PFL_6050 PFL_6154 PFL_6154 mntA mntA mntB mntB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
potG2Putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (380 aa)
PFL_0030Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414. (305 aa)
znuBHigh-affinity zinc ABC transporter, permease protein ZnuB; Identified by similarity to SP:P39832; match to protein family HMM PF00950. (262 aa)
PFL_0100Conserved hypothetical protein; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056. (382 aa)
cysASulfate ABC transporter, ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (329 aa)
PFL_0231Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (221 aa)
PFL_0232Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (219 aa)
PFL_0247Polar amino acid ABC transporter, permease protein; Identified by similarity to SP:P0AFT4; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (221 aa)
PFL_0340Amino acid ABC transporter, permease protein; Identified by similarity to GB:AAG04279.1; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (229 aa)
PFL_0341Amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (230 aa)
hisXHistidine ABC transporter, periplasmic histidine-binding protein; Identified by similarity to GB:AAF78097.1; match to protein family HMM PF04069. (321 aa)
hisWHistidine ABC transporter, permease protein; Identified by similarity to GB:AAF78098.1; match to protein family HMM PF00528. (283 aa)
PFL_0416Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (320 aa)
opuCAGlycine betaine/carnitine/choline ABC transporter, ATP-binding protein; Identified by similarity to SP:O34992; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. (385 aa)
opuCBGlycine betaine/carnitine/choline ABC transporter, permease protein; Identified by similarity to SP:O34878; match to protein family HMM PF00528. (217 aa)
opuCCOsmoprotectant transport system substrate-binding protein; Identified by similarity to SP:O32243; match to protein family HMM PF04069. (297 aa)
opuCB2Glycine betaine/carnitine/choline ABC transporter, permease protein; Identified by similarity to SP:O34878; match to protein family HMM PF00528. (238 aa)
dppA1Dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA 1; Identified by similarity to SP:P23847; match to protein family HMM PF00496. (531 aa)
dppA2Dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA 2; Identified by similarity to SP:P23847; match to protein family HMM PF00496. (533 aa)
dppA3Dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA 3; Identified by similarity to SP:P23847; match to protein family HMM PF00496. (541 aa)
lptBLipopolysaccharide ABC transporter, ATP-binding protein LptB; Identified by similarity to SP:P0A9V1; match to protein family HMM PF00005. (241 aa)
ttg2BToluene tolerance protein Ttg2B; Identified by similarity to GB:AAD17958.1; match to protein family HMM PF02405; match to protein family HMM TIGR00056. (265 aa)
aapQGeneral L-amino acid ABC transporter, permease protein AapQ; Identified by similarity to SP:Q52813; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (393 aa)
aapMGeneral L-amino acid ABC transporter, permease protein AapM; Identified by similarity to SP:Q52814; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (365 aa)
PFL_1067Permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (372 aa)
PFL_1068Permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739. (353 aa)
hisMHistidine ABC transporter, permease protein HisM; Identified by similarity to SP:P0AEU3; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (236 aa)
hisQHistidine ABC transporter, permease protein HisQ; Identified by similarity to SP:P52094; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (242 aa)
PFL_1710ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069. (283 aa)
PFL_1772ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (310 aa)
PFL_1773Putative ABC-2 type transporter permease protein; Identified by match to protein family HMM PF01061. (259 aa)
PFL_2031ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (424 aa)
PFL_2032ABC-2 type transporter; Identified by match to protein family HMM PF01061. (271 aa)
PFL_2196Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (236 aa)
PFL_2197Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (239 aa)
pedC2-phenylethanol ABC efflux transporter, permease protein PedC; Identified by similarity to GB:ABR57215.1; match to protein family HMM PF01061; match to protein family HMM TIGR03861. (263 aa)
pedB2-phenylethanol ABC efflux transporter, ATP-binding protein PedB; Identified by similarity to GB:ABR57216.1; match to protein family HMM PF00005; match to protein family HMM TIGR03864. (252 aa)
PFL_2283Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (218 aa)
PFL_2358Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (219 aa)
PFL_2359Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (215 aa)
PFL_2554ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069. (351 aa)
PFL_2603ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069. (337 aa)
PFL_2723Putative choline ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414. (313 aa)
pltJABC transporter, ATP binding/permease protein PltJ; Previously identified and sequenced (PMID 16269724; Brodhagen et al., 2005) called pltI in Pseudomonas sp. M18 (PMID: 16581203); identified by similarity to GB:AAY59067.1; match to protein family HMM PF00005. (589 aa)
pltKABC transporter, ATP-binding/permease protein PltK; Previously identified and sequenced (PMID 16269724; Brodhagen et al., 2005) Called PltJ in Pseudomonas sp. M18 (PMID 16581203); identified by similarity to GB:AAY59068.1; match to protein family HMM PF01061. (382 aa)
pltNABC transporter, permease protein PltN; Previously identified and sequenced (PMID 16269724; Brodhagen et al., 2005) Called pltK in Pseudomonas sp. M18 (PMID 16581203); identified by similarity to GB:AAY59069.1; match to protein family HMM PF01061. (372 aa)
PFL_2921ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. (527 aa)
fbpCiron(III) ABC transporter, ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (354 aa)
PFL_3059Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (236 aa)
PFL_3060Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (241 aa)
mtlKPolyol ABC transporter, ATP-binding protein MtlK; Identified by similarity to GB:AAC04471.1; match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. (367 aa)
PFL_3164Peptide/nickel transport system substrate-binding protein; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. (523 aa)
PFL_3301ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. (609 aa)
PFL_3302ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. (617 aa)
PFL_3549Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (220 aa)
PFL_3550Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (213 aa)
PFL_3570Peptide ABC transporter, periplasmic peptide-binding protein, YejA family; Identified by similarity to SP:P33913; match to protein family HMM PF00496. (620 aa)
PFL_4024Oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein; Identified by similarity to SP:P76128; match to protein family HMM PF00496. (524 aa)
PFL_4028Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to SP:P77622; match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (323 aa)
pvdEPyoverdine ABC transporter, permease/ATP-binding protein PvdE; Identified by similarity to GB:AAG05785.1; match to protein family HMM PF00005; match to protein family HMM TIGR01194. (550 aa)
PFL_4174Cation ABC transporter, MZT family, ATP-binding protein; Identified by match to protein family HMM PF00005. (247 aa)
PFL_4175Cation ABC transporter, MZT family, permease protein; Identified by match to protein family HMM PF00950. (299 aa)
PFL_4391ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. (329 aa)
aotMArginine/ornithine ABC transporter, permease protein AotM; Identified by similarity to GB:AAG04279.1; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (232 aa)
aotQArginine/ornithine ABC transporter, permease protein AotQ; Identified by similarity to GB:AAC71071.1; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (229 aa)
PFL_4614Putative sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. (386 aa)
PFL_4864ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. (369 aa)
gltJGlutamate/aspartate ABC transporter, permease protein GltJ; Identified by similarity to SP:P0AER3; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (248 aa)
gltKGlutamate/aspartate ABC transporter, permease protein GltK; Identified by similarity to SP:P0AER5; match to protein family HMM PF00528; match to protein family HMM TIGR01726. (223 aa)
PFL_5022Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (237 aa)
PFL_5023Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (229 aa)
potAPolyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (372 aa)
PFL_5495ABC-2 type transporter; Identified by match to protein family HMM PF01061. (272 aa)
prbAProline betaine ABC transporter, periplasmic proline betaine-binding protein; Identified by similarity to GB:CAC46833.1; match to protein family HMM PF00496; match to protein family HMM TIGR01409. (533 aa)
potA-2Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (374 aa)
PFL_5752ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414. (314 aa)
choXCholine ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414. (318 aa)
choWCholine ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR03416. (281 aa)
PFL_5890Putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR03265; Belongs to the ABC transporter superfamily. (358 aa)
potGPutrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (380 aa)
PFL_5974Putative ABC transporter, ATP binding/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF01061. (908 aa)
PFL_5975ABC-2 type transporter; Identified by match to protein family HMM PF01061. (372 aa)
PFL_6050Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. (527 aa)
PFL_6154Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. (278 aa)
mntAmanganese(II)/zinc(II) ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (221 aa)
mntBmanganese(II)/zinc(II) ABC transporter, permease protein; Identified by match to protein family HMM PF00950. (288 aa)
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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