Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nusA | nusB | lp_2043 | lp_1598 | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | Transcription termination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.775 |
| nusA | nusG | lp_2043 | lp_0617 | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.984 |
| nusA | rho | lp_2043 | lp_0511 | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | Transcription terminator factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.904 |
| nusB | nusA | lp_1598 | lp_2043 | Transcription termination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | 0.775 |
| nusB | nusG | lp_1598 | lp_0617 | Transcription termination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.679 |
| nusG | nusA | lp_0617 | lp_2043 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | 0.984 |
| nusG | nusB | lp_0617 | lp_1598 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Transcription termination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.679 |
| nusG | rho | lp_0617 | lp_0511 | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | Transcription terminator factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.865 |
| pyrR1 | pyrR2 | lp_2704 | lp_1782 | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (Probable). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (By similarity). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.972 |
| pyrR2 | pyrR1 | lp_1782 | lp_2704 | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (By similarity). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (Probable). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.972 |
| rho | nusA | lp_0511 | lp_2043 | Transcription terminator factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Transcription termination-antitermination factor NusA; Participates in both transcription termination and antitermination. | 0.904 |
| rho | nusG | lp_0511 | lp_0617 | Transcription terminator factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination. | 0.865 |