STRINGSTRING
choS choS pstD pstD pstC pstC lp_0802 lp_0802 glnM glnM glnP1 glnP1 oppB oppB oppC oppC ugpA ugpA ugpE ugpE opuB opuB opuD opuD lp_1745 lp_1745 lp_1748 lp_1748 lp_2077 lp_2077 glnPH2 glnPH2 glnP2 glnP2 lp_2351 lp_2351 lp_3210 lp_3210 lp_3643 lp_3643 lp_3644 lp_3644 phnE2 phnE2 phnE1 phnE1 mdxF mdxF mdxG mdxG potC potC potB potB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
choSGlycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein. (508 aa)
pstDPhosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (309 aa)
pstCPhosphate ABC transporter, permease protein. (294 aa)
lp_0802Polar amino acid ABC transporter, substrate binding and permease protein. (478 aa)
glnMGlutamine ABC transporter, permease protein. (213 aa)
glnP1Glutamine ABC transporter, permease protein. (217 aa)
oppBOligopeptide ABC transporter, permease protein. (309 aa)
oppCOligopeptide ABC transporter, permease protein. (344 aa)
ugpAGlycerol-3-phosphate ABC transporter, permease protein. (321 aa)
ugpEGlycerol-3-phosphate ABC transporter, permease protein. (276 aa)
opuBGlycine betaine/carnitine/choline ABC transporter, permease protein. (209 aa)
opuDGlycine betaine/carnitine/choline ABC transporter, permease protein. (217 aa)
lp_1745D-methionine ABC transporter, permease protein. (223 aa)
lp_1748Iron ABC transporter, permease protein. (553 aa)
lp_2077Nitrate/sulfonate/bicarbonate ABC transporter,permease protein. (580 aa)
glnPH2Glutamine ABC transporter, substrate binding and permease protein. (491 aa)
glnP2Glutamine/histidine ABC transporter, permease protein. (213 aa)
lp_2351D-Methionine-like precursor ABC transporter,permease protein. (230 aa)
lp_3210Cystine ABC transporter, permease protein. (235 aa)
lp_3643ABC transporter, permease protein,mannose-related oligosaccharides. (305 aa)
lp_3644ABC transporter, permease protein,mannose-related oligosaccharides. (320 aa)
phnE2Phosphonates ABC transporter, permease protein. (262 aa)
phnE1Phosphonates ABC transporter, permease protein. (284 aa)
mdxFMaltodextrin ABC transporter, permease protein. (429 aa)
mdxGMaltodextrin ABC transporter, permease protein. (294 aa)
potCSpermidine/putrescine ABC transporter, permease protein. (271 aa)
potBSpermidine/putrescine ABC transporter, permease protein. (277 aa)
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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