Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| pyrAA | pyrAB | lp_2701 | lp_2700 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | 0.999 |
| pyrAA | pyrB | lp_2701 | lp_2703 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
| pyrAA | pyrC | lp_2701 | lp_2702 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.999 |
| pyrAA | pyrD | lp_2701 | lp_2699 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.967 |
| pyrAA | pyrE | lp_2701 | lp_2697 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.968 |
| pyrAA | pyrF | lp_2701 | lp_2698 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.976 |
| pyrAA | pyrP | lp_2701 | lp_2371 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Uracil transport protein. | 0.883 |
| pyrAA | pyrR1 | lp_2701 | lp_2704 | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (Probable). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.915 |
| pyrAB | pyrAA | lp_2700 | lp_2701 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | 0.999 |
| pyrAB | pyrB | lp_2700 | lp_2703 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
| pyrAB | pyrC | lp_2700 | lp_2702 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.999 |
| pyrAB | pyrD | lp_2700 | lp_2699 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.997 |
| pyrAB | pyrE | lp_2700 | lp_2697 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.998 |
| pyrAB | pyrF | lp_2700 | lp_2698 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.999 |
| pyrAB | pyrP | lp_2700 | lp_2371 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Uracil transport protein. | 0.961 |
| pyrAB | pyrR1 | lp_2700 | lp_2704 | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (Probable). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.975 |
| pyrB | pyrAA | lp_2703 | lp_2701 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Carbamoyl-phosphate synthase,pyrimidine-specific, small chain; Belongs to the CarA family. | 0.999 |
| pyrB | pyrAB | lp_2703 | lp_2700 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Carbamoyl-phosphate synthase,pyrimidine-specific, large chain. | 0.999 |
| pyrB | pyrC | lp_2703 | lp_2702 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.999 |
| pyrB | pyrD | lp_2703 | lp_2699 | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily. | 0.999 |
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