(13 nodes) Mixed, incl. Sensor histidine kinase LiaS/VraS, and Cell wall-active antibiotic response protein network (Oceanobacillus iheyensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OB1160	Hypothetical conserved protein; CDS_ID OB1160. (267 aa)
	OB1161	Two-component sensor histidine kinase; CDS_ID OB1161. (356 aa)
	OB1162	Two-component response regulator; CDS_ID OB1162. (209 aa)
	OB1163	Protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. (145 aa)
	OB1164	Hypothetical conserved protein; CDS_ID OB1164. (156 aa)
	OB1922	Hypothetical conserved protein; CDS_ID OB1922. (288 aa)
	OB2822	Two-component response regulator; CDS_ID OB2822. (210 aa)
	OB2823	Two-component sensor histidine kinase; CDS_ID OB2823. (350 aa)
	OB2824	Hypothetical conserved protein; CDS_ID OB2824. (242 aa)
	OB2825	Hypothetical conserved protein; CDS_ID OB2825. (212 aa)
	OB2826	Hypothetical protein; CDS_ID OB2826. (117 aa)
	OB2955	Hypothetical protein; CDS_ID OB2955. (113 aa)
	OB3160	Hypothetical conserved protein; CDS_ID OB3160. (198 aa)

Your Current Organism:

Oceanobacillus iheyensis

NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OB1160	OB1161	gene:10733399	gene:10733400	Hypothetical conserved protein; CDS_ID OB1160.	Two-component sensor histidine kinase; CDS_ID OB1161.	0.901
OB1160	OB1162	gene:10733399	gene:10733401	Hypothetical conserved protein; CDS_ID OB1160.	Two-component response regulator; CDS_ID OB1162.	0.778
OB1160	OB1163	gene:10733399	gene:10733402	Hypothetical conserved protein; CDS_ID OB1160.	Protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.	0.516
OB1160	OB1164	gene:10733399	gene:10733403	Hypothetical conserved protein; CDS_ID OB1160.	Hypothetical conserved protein; CDS_ID OB1164.	0.512
OB1160	OB2823	gene:10733399	gene:10735075	Hypothetical conserved protein; CDS_ID OB1160.	Two-component sensor histidine kinase; CDS_ID OB2823.	0.472
OB1160	OB2824	gene:10733399	gene:10735076	Hypothetical conserved protein; CDS_ID OB1160.	Hypothetical conserved protein; CDS_ID OB2824.	0.900
OB1160	OB2825	gene:10733399	gene:10735077	Hypothetical conserved protein; CDS_ID OB1160.	Hypothetical conserved protein; CDS_ID OB2825.	0.474
OB1161	OB1160	gene:10733400	gene:10733399	Two-component sensor histidine kinase; CDS_ID OB1161.	Hypothetical conserved protein; CDS_ID OB1160.	0.901
OB1161	OB1162	gene:10733400	gene:10733401	Two-component sensor histidine kinase; CDS_ID OB1161.	Two-component response regulator; CDS_ID OB1162.	0.996
OB1161	OB1163	gene:10733400	gene:10733402	Two-component sensor histidine kinase; CDS_ID OB1161.	Protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.	0.546
OB1161	OB1164	gene:10733400	gene:10733403	Two-component sensor histidine kinase; CDS_ID OB1161.	Hypothetical conserved protein; CDS_ID OB1164.	0.545
OB1161	OB2822	gene:10733400	gene:10735074	Two-component sensor histidine kinase; CDS_ID OB1161.	Two-component response regulator; CDS_ID OB2822.	0.986
OB1161	OB2823	gene:10733400	gene:10735075	Two-component sensor histidine kinase; CDS_ID OB1161.	Two-component sensor histidine kinase; CDS_ID OB2823.	0.918
OB1161	OB2824	gene:10733400	gene:10735076	Two-component sensor histidine kinase; CDS_ID OB1161.	Hypothetical conserved protein; CDS_ID OB2824.	0.712
OB1161	OB2825	gene:10733400	gene:10735077	Two-component sensor histidine kinase; CDS_ID OB1161.	Hypothetical conserved protein; CDS_ID OB2825.	0.425
OB1162	OB1160	gene:10733401	gene:10733399	Two-component response regulator; CDS_ID OB1162.	Hypothetical conserved protein; CDS_ID OB1160.	0.778
OB1162	OB1161	gene:10733401	gene:10733400	Two-component response regulator; CDS_ID OB1162.	Two-component sensor histidine kinase; CDS_ID OB1161.	0.996
OB1162	OB1163	gene:10733401	gene:10733402	Two-component response regulator; CDS_ID OB1162.	Protein-disulfide oxidoreductase; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.	0.541
OB1162	OB1164	gene:10733401	gene:10733403	Two-component response regulator; CDS_ID OB1162.	Hypothetical conserved protein; CDS_ID OB1164.	0.534
OB1162	OB2822	gene:10733401	gene:10735074	Two-component response regulator; CDS_ID OB1162.	Two-component response regulator; CDS_ID OB2822.	0.903

page 1 of 5

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About