STRINGSTRING
OB1870 OB1870 OB0014 OB0014 OB0045 OB0045 OB0053 OB0053 OB0056 OB0056 OB0062 OB0062 OB0063 OB0063 OB0073 OB0073 OB0090 OB0090 sigH sigH OB0106 OB0106 rplA rplA fus fus tufA tufA infA infA OB0207 OB0207 OB0209 OB0209 OB0228 OB0228 OB0229 OB0229 OB0277 OB0277 OB0289 OB0289 OB0292 OB0292 OB0320 OB0320 OB0325 OB0325 OB0328 OB0328 OB0346 OB0346 OB0354 OB0354 OB0357 OB0357 OB0369 OB0369 OB0382 OB0382 OB0394 OB0394 OB0396 OB0396 OB0412 OB0412 OB0425 OB0425 OB0429 OB0429 OB0445 OB0445 OB0498 OB0498 OB0513 OB0513 OB0520 OB0520 OB0529 OB0529 OB0567 OB0567 OB0579 OB0579 OB0582 OB0582 OB0584 OB0584 OB0594 OB0594 OB0603 OB0603 OB0612 OB0612 OB0613 OB0613 OB0622 OB0622 OB0624 OB0624 OB0625 OB0625 OB0628 OB0628 OB0629 OB0629 OB0630 OB0630 OB0636 OB0636 OB0652 OB0652 OB0677 OB0677 OB0719 OB0719 OB0722 OB0722 OB0753 OB0753 OB0757 OB0757 OB0778 OB0778 OB0785 OB0785 OB0812 OB0812 OB0813 OB0813 OB0820 OB0820 OB0821 OB0821 OB0831 OB0831 OB0835 OB0835 fruR fruR OB0845 OB0845 OB0884 OB0884 OB0885 OB0885 OB0905 OB0905 OB0911 OB0911 OB0912 OB0912 OB0944 OB0944 OB0948 OB0948 OB0950 OB0950 OB0962 OB0962 OB0967 OB0967 OB0993 OB0993 OB0995 OB0995 OB1010 OB1010 OB1019 OB1019 OB1069 OB1069 OB1102 OB1102 OB1121 OB1121 OB1141 OB1141 OB1162 OB1162 OB1198 OB1198 OB1213 OB1213 OB1237 OB1237 OB1246 OB1246 OB1248 OB1248 OB1269 OB1269 OB1298 OB1298 OB1344 OB1344 OB1348 OB1348 OB1359 OB1359 OB1363 OB1363 OB1400 OB1400 OB1461 OB1461 sigE sigE sigG sigG OB1478 OB1478 OB1482 OB1482 OB1497 OB1497 OB1507 OB1507 OB1521 OB1521 OB1551 OB1551 sigD sigD tsf tsf nusA nusA infB infB pnpA pnpA OB1615 OB1615 OB1625 OB1625 OB1635 OB1635 glnR glnR lexA lexA kinC kinC OB1742 OB1742 cspB cspB birA birA traP traP OB1818 OB1818 OB1819 OB1819 sigF sigF spoIIAB spoIIAB spoIIAA spoIIAA OB1849 OB1849 spo0A spo0A ahrC ahrC nusB nusB glcT glcT efp efp OB1900 OB1900 sigA sigA OB1947 OB1947 hrcA hrcA OB1972 OB1972 OB1983 OB1983 sigK sigK greA greA OB2016 OB2016 OB2038 OB2038 OB2093 OB2093 OB2109 OB2109 OB2110 OB2110 OB2121 OB2121 OB2146 OB2146 OB2149 OB2149 OB2152 OB2152 OB2158 OB2158 OB2164 OB2164 OB2165 OB2165 OB2175 OB2175 OB2183 OB2183 OB2201 OB2201 OB2212 OB2212 ccpA ccpA OB2270 OB2270 OB2272 OB2272 OB2290 OB2290 OB2313 OB2313 OB2328 OB2328 OB2337 OB2337 OB2361 OB2361 OB2389 OB2389 OB2398 OB2398 OB2409 OB2409 OB2425 OB2425 cggR cggR OB2441 OB2441 OB2464 OB2464 OB2468 OB2468 OB2477 OB2477 OB2495 OB2495 OB2498 OB2498 OB2503 OB2503 OB2504 OB2504 OB2509 OB2509 OB2515 OB2515 degU degU OB2521 OB2521 sinR sinR OB2527 OB2527 OB2546 OB2546 OB2557 OB2557 OB2567 OB2567 rbsR rbsR OB2582 OB2582 OB2602 OB2602 OB2606 OB2606 OB2629 OB2629 OB2653 OB2653 OB2660 OB2660 OB2661 OB2661 OB2674 OB2674 OB2688 OB2688 OB2705 OB2705 OB2710 OB2710 OB2720 OB2720 OB2739 OB2739 OB2756 OB2756 OB2764 OB2764 OB2765 OB2765 OB2770 OB2770 OB2773 OB2773 OB2784 OB2784 OB2800 OB2800 OB2805 OB2805 OB2808 OB2808 OB2820 OB2820 OB2822 OB2822 OB2830 OB2830 OB2842 OB2842 OB2847 OB2847 OB2850 OB2850 OB2873 OB2873 OB2880 OB2880 OB2897 OB2897 OB2898 OB2898 OB2959 OB2959 OB2960 OB2960 OB2998 OB2998 rpoE rpoE OB3009 OB3009 OB3043 OB3043 OB3073 OB3073 OB3092 OB3092 OB3139 OB3139 OB3152 OB3152 OB3153 OB3153 OB3169 OB3169 OB3181 OB3181 OB3184 OB3184 OB3185 OB3185 gntR gntR OB3201 OB3201 OB3204 OB3204 OB3219 OB3219 OB3228 OB3228 OB3229 OB3229 OB3233 OB3233 OB3241 OB3241 OB3250 OB3250 OB3259 OB3259 OB3277 OB3277 OB3287 OB3287 OB3308 OB3308 OB3311 OB3311 OB3318 OB3318 OB3319 OB3319 OB3324 OB3324 OB3350 OB3350 OB3352 OB3352 OB3356 OB3356 OB3380 OB3380 OB3397 OB3397 OB3407 OB3407 OB3410 OB3410 OB3416 OB3416 OB3417 OB3417 OB3452 OB3452 OB3458 OB3458 OB3476 OB3476
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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OB1870Transcriptional regulator (sigma-L-dependent); CDS_ID OB1870. (683 aa)
OB0014Hypothetical protein; CDS_ID OB0014. (96 aa)
OB0045Transcriptional pleiotropic regulator of transition state genes; CDS_ID OB0045. (91 aa)
OB0053Hypothetical conserved protein; CDS_ID OB0053. (82 aa)
OB0056Transcriptional repressor of purine operon; CDS_ID OB0056. (269 aa)
OB0062Hypothetical conserved protein; CDS_ID OB0062. (76 aa)
OB0063Transcription-repair coupling factor (TRCF); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1173 aa)
OB0073Transcriptional regulator (marR family); CDS_ID OB0073. (150 aa)
OB0090Transcriptional repressor of class III stress genes; CDS_ID OB0090; Belongs to the CtsR family. (155 aa)
sigHRNA polymerase sigma-H factor (sigma-30); CDS_ID OB0103; Belongs to the sigma-70 factor family. (217 aa)
OB0106Transcriptional antiterminator; Participates in transcription elongation, termination and antitermination. (178 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (230 aa)
fusTranslation elongation factor EF-G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF- [...] (692 aa)
tufAElongation factor EF-Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (395 aa)
infATranslation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (72 aa)
OB0207Transcriptional repressor of PBSX genes; CDS_ID OB0207. (121 aa)
OB0209Sigma factor-like positive control facor; CDS_ID OB0209. (170 aa)
OB0228RNA polymerase ECF-type sigma factor (sigma-W); CDS_ID OB0228; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
OB0229Hypothetical conserved protein; Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation (By similarity); Belongs to the zinc-associated anti-sigma factor (ZAS) superfamily. Anti-sigma-W factor family. (213 aa)
OB0277Cadmium efflux system accessory protein (cadC protein); CDS_ID OB0277. (123 aa)
OB0289Transcriptional regulator; CDS_ID OB0289. (184 aa)
OB0292Hypothetical conserved protein; Nitric oxide-responsive transcriptional regulator. (147 aa)
OB0320Transcriptional regulator; CDS_ID OB0320. (141 aa)
OB0325Transcriptional regulator (ArsR family); CDS_ID OB0325. (100 aa)
OB0328Transcriptional regulator (TetR/AcrR family); CDS_ID OB0328. (215 aa)
OB0346Transcriptional regulator (TetR/AcrR family); CDS_ID OB0346. (190 aa)
OB0354Hypothetical conserved protein; CDS_ID OB0354. (116 aa)
OB0357Two-component response regulator; CDS_ID OB0357. (256 aa)
OB0369Transcriptional regulator (GntR family); CDS_ID OB0369. (236 aa)
OB0382Transcriptional activator of multidrug-efflux transporter genes; CDS_ID OB0382. (254 aa)
OB0394Hypothetical conserved protein; CDS_ID OB0394. (111 aa)
OB0396Hypothetical conserved protein; CDS_ID OB0396. (349 aa)
OB0412Hypothetical protein; CDS_ID OB0412. (159 aa)
OB0425Transcriptional activator of multidrug-efflux transporter; CDS_ID OB0425. (277 aa)
OB0429Transcriptional regulator (GntR family); CDS_ID OB0429. (124 aa)
OB0445Transcriptional regulator (MarR family); CDS_ID OB0445. (143 aa)
OB0498Transcriptional regulator (DeoR family); CDS_ID OB0498. (257 aa)
OB0513Transcriptional regulator (GntR family); CDS_ID OB0513. (125 aa)
OB0520Transcriptional regulator (TetR/AcrR family); CDS_ID OB0520. (203 aa)
OB0529Hypothetical conserved protein; CDS_ID OB0529. (179 aa)
OB0567Hypothetical conserved protein; CDS_ID OB0567. (109 aa)
OB0579Cold shock protein; CDS_ID OB0579. (65 aa)
OB0582Hypothetical conserved protein; CDS_ID OB0582. (224 aa)
OB0584Two-component response regulator; CDS_ID OB0584. (227 aa)
OB0594Two-component response regulator; CDS_ID OB0594. (229 aa)
OB0603Transcriptional regulator (MarR family); CDS_ID OB0603. (150 aa)
OB0612Transcriptional regulator (GntR family); CDS_ID OB0612. (248 aa)
OB0613Transcriptional regulator; CDS_ID OB0613. (282 aa)
OB0622Hypothetical conserved protein; CDS_ID OB0622. (94 aa)
OB0624Positive regulator of sigma-B activity; CDS_ID OB0624. (289 aa)
OB0625Negative regulator of sigma-B activity (antagonist of RsbT); CDS_ID OB0625. (118 aa)
OB0628Positive regulator of sigma-B activity (anti-anti-sigma factor); CDS_ID OB0628; Belongs to the anti-sigma-factor antagonist family. (110 aa)
OB0629Negative regulator of sigma-B activity (switch protein/serine kinase, anti-sigma factor); Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). (158 aa)
OB0630RNA polymerase general stress sigma factor (sigma B); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (263 aa)
OB0636Transcriptional regulator (tetR-family); CDS_ID OB0636. (205 aa)
OB0652Hypothetical conserved protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (209 aa)
OB0677Transcriptional regulator (TetR/AcrR family); CDS_ID OB0677. (188 aa)
OB0719Transcriptional regulator (TetR family); CDS_ID OB0719. (197 aa)
OB0722Transcriptional regulator (AraC/XylS family); CDS_ID OB0722. (287 aa)
OB0753Hypothetical conserved protein; CDS_ID OB0753. (98 aa)
OB0757Hypothetical conserved protein; CDS_ID OB0757. (206 aa)
OB0778Hypothetical conserved protein; CDS_ID OB0778. (517 aa)
OB0785Transcriptional regulator; CDS_ID OB0785. (138 aa)
OB0812Transcriptional regulator; CDS_ID OB0812. (243 aa)
OB0813Transcriptional regulator; CDS_ID OB0813. (573 aa)
OB0820Hypothetical protein; CDS_ID OB0820. (228 aa)
OB0821Hypothetical conserved protein; CDS_ID OB0821. (175 aa)
OB0831Two-component response regulator; CDS_ID OB0831. (227 aa)
OB0835Transcriptional regulator; CDS_ID OB0835. (207 aa)
fruRTranscriptional repressor of fructose operon; CDS_ID OB0840. (248 aa)
OB0845Hypothetical conserved protein; CDS_ID OB0845. (190 aa)
OB0884Hypothetical conserved protein; CDS_ID OB0884. (59 aa)
OB0885Transcriptional regulator (GntR family); CDS_ID OB0885. (125 aa)
OB0905Transcriptional regulator (Fur family); CDS_ID OB0905; Belongs to the Fur family. (147 aa)
OB0911Transcriptional regulator (AraC/XylS family) (divided with OB0911 and OB0912); CDS_ID OB0911. (103 aa)
OB0912Transcriptional regulator (AraC/XylS family) (divided with OB0911 and OB0912); CDS_ID OB0912. (85 aa)
OB0944Hypothetical conserved protein; CDS_ID OB0944. (261 aa)
OB0948Hypothetical conserved protein; CDS_ID OB0948. (115 aa)
OB0950Transcriptional regulator; CDS_ID OB0950. (100 aa)
OB0962Transcriptional regulator (ArsR family); CDS_ID OB0962. (105 aa)
OB0967Transcriptional regulator (GntR family); CDS_ID OB0967. (238 aa)
OB0993Transcriptional regulator (TetR/AcrR family); CDS_ID OB0993. (186 aa)
OB0995Transcriptional regulator; CDS_ID OB0995. (191 aa)
OB1010Transcriptional regulator (sigma-L-dependent); CDS_ID OB1010. (584 aa)
OB1019Cold shock protein; CDS_ID OB1019. (66 aa)
OB1069Two-component response regulator; CDS_ID OB1069. (215 aa)
OB1102RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. (242 aa)
OB1121Repressor protein; CDS_ID OB1121. (66 aa)
OB1141Hypothetical conserved protein; CDS_ID OB1141. (99 aa)
OB1162Two-component response regulator; CDS_ID OB1162. (209 aa)
OB1198Transcriptional regulator (MarR family); CDS_ID OB1198. (139 aa)
OB1213Hypothetical conserved protein; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. (131 aa)
OB1237Transcriptional regulator (AraC/XylS family) (partial); CDS_ID OB1237. (153 aa)
OB1246Transcriptional regulator (MarR family); CDS_ID OB1246. (150 aa)
OB1248RNA polymerase ECF-type sigma factor; CDS_ID OB1248; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
OB1269RNA polymerase ECF-type sigma factor; CDS_ID OB1269; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
OB1298RNA polymerase ECF-type sigma factor; CDS_ID OB1298; Belongs to the sigma-70 factor family. ECF subfamily. (175 aa)
OB1344Hypothetical conserved protein; CDS_ID OB1344. (189 aa)
OB1348Transcriptional regulator; CDS_ID OB1348. (452 aa)
OB1359Nitrogen fixation positive activator (partial); CDS_ID OB1359. (539 aa)
OB1363Hypothetical conserved protein; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. (135 aa)
OB1400Transcriptional regulator (ArsR family); CDS_ID OB1400. (103 aa)
OB1461Hypothetical conserved protein; CDS_ID OB1461; Belongs to the MraZ family. (143 aa)
sigEStage II sporulation protein GB (RNA polymerase sporulation-specific sigma E factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (239 aa)
sigGStage III sporulation protein G (RNA polymerase sporulation-specific sigma G factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (260 aa)
OB1478Hypothetical conserved protein; CDS_ID OB1478; Belongs to the multicopper oxidase YfiH/RL5 family. (256 aa)
OB1482Hypothetical conserved protein; CDS_ID OB1482. (258 aa)
OB1497Transcriptional regulator (LysR family); CDS_ID OB1497; Belongs to the LysR transcriptional regulatory family. (285 aa)
OB1507Hypothetical conserved protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (448 aa)
OB1521Hypothetical conserved protein; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. (191 aa)
OB1551Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (259 aa)
sigDRNA polymerase sigma-D factor; CDS_ID OB1582; Belongs to the sigma-70 factor family. (258 aa)
tsfElongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (294 aa)
nusATranscriptional termination-antitermination factor; Participates in both transcription termination and antitermination. (364 aa)
infBTranslation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (692 aa)
pnpAPolyribonucleotide nucleotidyltransferase alpha chain; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (705 aa)
OB1615Transcriptional regulator (GntR family); CDS_ID OB1615. (241 aa)
OB1625Hypothetical conserved protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (520 aa)
OB1635Host factor-1 protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (74 aa)
glnRGlutamine synthetase transcription repressor; CDS_ID OB1650. (132 aa)
lexATranscriptional repressor of SOS regulon; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (207 aa)
kinCSporulation kinase C (sensor kinase); CDS_ID OB1680. (364 aa)
OB1742Hypothetical conserved protein; CDS_ID OB1742. (200 aa)
cspBCold shock protein; CDS_ID OB1743. (66 aa)
birABiotin [acetyl-CoA carboxylase] ligase : transcriptional repressor of the biotin operon; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (328 aa)
traPTryptophan operon RNA-binding attenuation protein; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan (By similarity); Belongs to the MtrB family. (74 aa)
OB1818Two-component sensor histidine kinase; CDS_ID OB1818. (584 aa)
OB1819Two-component response regulator; CDS_ID OB1819. (238 aa)
sigFStage II sporulation protein AC (RNA polymerase sigma-F factor); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (250 aa)
spoIIABStage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (146 aa)
spoIIAAStage II sporulation protein AA protein (anti-sigma F factor antagonist); CDS_ID OB1841; Belongs to the anti-sigma-factor antagonist family. (117 aa)
OB1849Ferric uptake regulation protein (Fur family); CDS_ID OB1849; Belongs to the Fur family. (151 aa)
spo0AStage 0 sporulation protein (two-component response regulator); May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (260 aa)
ahrCArginine repressor (arginine metabolism regulator); Regulates arginine biosynthesis genes. (149 aa)
nusBTranscriptional terminator; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (126 aa)
glcTTranscriptional antiterminator; CDS_ID OB1883. (280 aa)
efpTranslation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (185 aa)
OB1900Transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (147 aa)
sigARNA polymerase sigma-43(-A) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (380 aa)
OB1947Hypothetical conserved protein; CDS_ID OB1947. (209 aa)
hrcATranscriptional repressor of class I heat-shock genes; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (342 aa)
OB1972GTP-binding protein (elongation factor family); Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (602 aa)
OB1983Hypothetical conserved protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. (118 aa)
sigKRNA polymerase sigma 28 (sigam K) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (234 aa)
greATranscriptional elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (158 aa)
OB2016Hypothetical conserved protein; CDS_ID OB2016. (139 aa)
OB2038Hypothetical conserved protein; CDS_ID OB2038. (243 aa)
OB2093Transcriptional regulator (AraC/XylS family); CDS_ID OB2093. (769 aa)
OB2109Transcriptional regulator (MarR family); CDS_ID OB2109. (150 aa)
OB2110Transcriptional regulator; CDS_ID OB2110. (74 aa)
OB2121Transcriptional regulator (TetR/AcrR family); CDS_ID OB2121. (195 aa)
OB2146Hypothetical protein; CDS_ID OB2146. (95 aa)
OB2149Hypothetical conserved protein; CDS_ID OB2149. (92 aa)
OB2152Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (168 aa)
OB2158Hypothetical conserved protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. (157 aa)
OB2164Two-component sensor histidine kinase involved in phosphate regulation; CDS_ID OB2164. (453 aa)
OB2165Two-component response regulator involved in phosphate regulation; CDS_ID OB2165. (231 aa)
OB2175Transcriptional regulator (GntR family); CDS_ID OB2175. (201 aa)
OB2183Hypothetical conserved protein; CDS_ID OB2183. (435 aa)
OB2201Hypothetical conserved protein; CDS_ID OB2201. (214 aa)
OB2212Transcriptional regulator (IclR family); CDS_ID OB2212. (248 aa)
ccpATranscriptional regulator involved in carbon catabolite control; CDS_ID OB2226. (332 aa)
OB2270Transcriptional regulator (LysR family); CDS_ID OB2270; Belongs to the LysR transcriptional regulatory family. (289 aa)
OB2272Transcriptional regulator (GntR family); CDS_ID OB2272. (242 aa)
OB2290Peptide chain release factor RF-3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (523 aa)
OB2313RNA polymerase ECF-type sigma factor; CDS_ID OB2313; Belongs to the sigma-70 factor family. ECF subfamily. (155 aa)
OB2328Unknown conserved protein (partial); CDS_ID OB2328. (116 aa)
OB2337Hypothetical protein; CDS_ID OB2337; Belongs to the sigma-70 factor family. ECF subfamily. (708 aa)
OB2361Hypothetical conserved protein; CDS_ID OB2361. (207 aa)
OB2389Arsenate reductase; CDS_ID OB2389; Belongs to the ArsC family. (118 aa)
OB2398Zinc-specific metalloregulatory protein (Fur family); CDS_ID OB2398; Belongs to the Fur family. (137 aa)
OB2409Hypothetical protein; CDS_ID OB2409. (194 aa)
OB2425Transcriptional regulator (ArsR family); CDS_ID OB2425. (115 aa)
cggRTranscriptional repressor of gapA operon (central glycolytic genes regulator); CDS_ID OB2439. (339 aa)
OB2441RNA polymerase sigma-54 factor; CDS_ID OB2441. (430 aa)
OB2464Transcriptional regulator (TetR/AcrR family); CDS_ID OB2464. (191 aa)
OB2468Hypothetical conserved protein; Displays ATPase and GTPase activities. (293 aa)
OB2477Transcriptional antiterminator of glycerol uptake operon; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. (180 aa)
OB2495Peptide chain release factor RF-2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (327 aa)
OB2498Hypothetical conserved protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (185 aa)
OB2503Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (74 aa)
OB2504Hypothetical conserved protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (147 aa)
OB2509Negative regulator of flagellin synthesis (anti-sigma factor); CDS_ID OB2509. (85 aa)
OB2515Transcriptional regulator; CDS_ID OB2515. (225 aa)
degUTwo-component response regulator involved in degradative enzyme; CDS_ID OB2519. (230 aa)
OB2521Hypothetical conserved protein; CDS_ID OB2521. (218 aa)
sinRTranscriptional regulator of post-exponential-phase responses (PbsX(xre)family); CDS_ID OB2524. (108 aa)
OB2527Hypothetical conserved protein; CDS_ID OB2527. (265 aa)
OB2546Hypothetical conserved protein; CDS_ID OB2546. (206 aa)
OB2557Transcriptional regulator involved in carbon catabolite control; CDS_ID OB2557. (338 aa)
OB2567Transcriptional regulator involved in carbon catabolite control; CDS_ID OB2567. (340 aa)
rbsRTranscriptional repressor of ribose operon; CDS_ID OB2577. (327 aa)
OB2582Hypothetical protein; CDS_ID OB2582. (436 aa)
OB2602Transcriptional antiterminator (BglG family); CDS_ID OB2602. (696 aa)
OB2606Transcriptional regulator (GntR family); CDS_ID OB2606. (222 aa)
OB2629Transcriptional regulator; CDS_ID OB2629. (466 aa)
OB2653Hypothetical conserved protein; CDS_ID OB2653. (86 aa)
OB2660RNA polymerase ECF-type sigma factor; CDS_ID OB2660; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
OB2661Hypothetical protein; CDS_ID OB2661. (253 aa)
OB2674Transcriptional regulator (TetR/AcrR family); CDS_ID OB2674. (195 aa)
OB2688Transcriptional regulator (GntR family); CDS_ID OB2688. (464 aa)
OB2705Transcriptional regulator; CDS_ID OB2705. (333 aa)
OB2710Hypothetical protein; CDS_ID OB2710. (276 aa)
OB2720Transcriptional antiterminator of glycerol uptake operon; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. (188 aa)
OB2739Transcriptional regulator; CDS_ID OB2739. (594 aa)
OB2756Hypothetical conserved protein; CDS_ID OB2756. (685 aa)
OB2764Transcriptional antiterminator of lichenan operon; CDS_ID OB2764. (648 aa)
OB2765Mannose-6-phosphate isomerase; CDS_ID OB2765; Belongs to the mannose-6-phosphate isomerase type 1 family. (319 aa)
OB2770Transcriptional regulator (TetR/AcrR family); CDS_ID OB2770. (298 aa)
OB2773Hypothetical protein; CDS_ID OB2773; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
OB2784Hypothetical conserved protein; CDS_ID OB2784. (377 aa)
OB2800Transcriptional repressor of the arabinose operon; CDS_ID OB2800. (363 aa)
OB2805Hypothetical conserved protein; CDS_ID OB2805. (125 aa)
OB2808Transcriptional repressor of phosphotransferase system; CDS_ID OB2808. (259 aa)
OB2820Transcriptional regulator (IclR family); CDS_ID OB2820. (257 aa)
OB2822Two-component response regulator; CDS_ID OB2822. (210 aa)
OB2830Hypothetical conserved protein; CDS_ID OB2830. (380 aa)
OB2842Transcriptional regulator (GntR family); CDS_ID OB2842. (234 aa)
OB2847Transcriptional regulator (GntR family); CDS_ID OB2847. (219 aa)
OB2850Two-component response regulator; CDS_ID OB2850. (199 aa)
OB2873Transcriptional regulator (LysR family); CDS_ID OB2873; Belongs to the LysR transcriptional regulatory family. (296 aa)
OB2880Transcriptional regulator (GntR family); CDS_ID OB2880. (213 aa)
OB2897Nitrate:nitrite response transcriptional regulator; CDS_ID OB2897. (231 aa)
OB2898Transcriptional regulator; CDS_ID OB2898. (221 aa)
OB2959Transcriptional regulator of sigma-E- and sigma-K-dependent; CDS_ID OB2959. (94 aa)
OB2960Hypothetical conserved protein; CDS_ID OB2960. (337 aa)
OB2998Peptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (356 aa)
rpoEDNA-directed RNA polymerase delta chain; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (173 aa)
OB3009Transcriptional regulator (TetR/AcrR family); CDS_ID OB3009. (202 aa)
OB3043Hypothetical conserved protein; CDS_ID OB3043. (108 aa)
OB3073Hypothetical protein; CDS_ID OB3073. (419 aa)
OB3092RNA polymerase ECF-type sigma factor; CDS_ID OB3092; Belongs to the sigma-70 factor family. ECF subfamily. (179 aa)
OB3139Transcriptional regulator; CDS_ID OB3139. (66 aa)
OB3152Hypothetical conserved protein; CDS_ID OB3152; Belongs to the ArsC family. (136 aa)
OB3153Transcriptional regulator (TetR/AcrR family); CDS_ID OB3153. (209 aa)
OB3169Hypothetical protein; CDS_ID OB3169. (193 aa)
OB3181Transcriptional regulator (LysR family); CDS_ID OB3181; Belongs to the LysR transcriptional regulatory family. (287 aa)
OB3184Transcriptional regulator (tetR-family); CDS_ID OB3184. (199 aa)
OB3185Hypothetical protein; CDS_ID OB3185. (98 aa)
gntRTranscriptional repressor of gluconate operon; CDS_ID OB3190. (240 aa)
OB3201Transcriptional regulator (GntR family); CDS_ID OB3201. (235 aa)
OB3204L-seryl-tRNA(Sec) selenium transferase (selenocysteine synthase); CDS_ID OB3204. (355 aa)
OB3219Two-component response regulator (partial); CDS_ID OB3219. (237 aa)
OB3228Hypothetical conserved protein; CDS_ID OB3228. (187 aa)
OB3229Hypothetical conserved protein; CDS_ID OB3229. (159 aa)
OB3233Transcriptional regulator (IclR family); CDS_ID OB3233. (255 aa)
OB3241Transcriptional regulator (LacI-family); CDS_ID OB3241. (343 aa)
OB3250Two-component response regulator; CDS_ID OB3250. (222 aa)
OB3259Transcriptional regulator (GntR family); CDS_ID OB3259. (206 aa)
OB3277Hypothetical conserved protein; CDS_ID OB3277. (102 aa)
OB3287Hypothetical protein; CDS_ID OB3287. (416 aa)
OB3308Hypothetical protein; CDS_ID OB3308. (122 aa)
OB3311Hypothetical protein; CDS_ID OB3311. (199 aa)
OB3318Transcriptional regulator (MerR family); CDS_ID OB3318. (257 aa)
OB3319Hypothetical protein; CDS_ID OB3319. (244 aa)
OB3324Hypothetical conserved protein; CDS_ID OB3324. (64 aa)
OB3350Transcriptional regulator; CDS_ID OB3350. (117 aa)
OB3352Transcriptional regulator (tetR-family); CDS_ID OB3352. (191 aa)
OB3356RNA polymerase ECF-type sigma factor; CDS_ID OB3356; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
OB3380Transcriptional regulator (TetR-family); CDS_ID OB3380. (171 aa)
OB3397Hypothetical conserved protein; CDS_ID OB3397. (268 aa)
OB3407Transcriptional regulator (LysR family); CDS_ID OB3407; Belongs to the LysR transcriptional regulatory family. (291 aa)
OB3410Transcriptional regulator; CDS_ID OB3410. (319 aa)
OB3416Hypothetical conserved protein; CDS_ID OB3416. (150 aa)
OB3417Hypothetical conserved protein; CDS_ID OB3417. (633 aa)
OB3452Two-component response regulator; CDS_ID OB3452. (233 aa)
OB3458Transcriptional regulator; CDS_ID OB3458. (144 aa)
OB3476Transcriptional repressor (LacI family); CDS_ID OB3476. (327 aa)
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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