STRINGSTRING
AOS90502.1 AOS90502.1 AOS90506.1 AOS90506.1 whiB-2 whiB-2 AOS90705.1 AOS90705.1 AOS90706.1 AOS90706.1 nucS nucS AOS94438.1 AOS94438.1 AOS91921.1 AOS91921.1 AOS94443.1 AOS94443.1 glnE glnE AOS91923.1 AOS91923.1 AOS91924.1 AOS91924.1 AOS91928.1 AOS91928.1 lipA lipA lipB lipB AOS91930.1 AOS91930.1 AOS92548.1 AOS92548.1 AOS92922.1 AOS92922.1 AOS92933.1 AOS92933.1 AOS92935.1 AOS92935.1 AOS92936.1 AOS92936.1 AOS92944.1 AOS92944.1 AOS92962.2 AOS92962.2 AOS93071.1 AOS93071.1 rnhB rnhB AOS93073.1 AOS93073.1 APD84324.1 APD84324.1 AOS93387.1 AOS93387.1 APD84325.1 APD84325.1 AOS93410.1 AOS93410.1 whiB-4 whiB-4 whiB3 whiB3 AOS94680.2 AOS94680.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOS90502.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
AOS90506.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
whiB-2Transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (116 aa)
AOS90705.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (61 aa)
AOS90706.1Folate-binding protein YgfZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (364 aa)
nucSEndonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. (223 aa)
AOS94438.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
AOS91921.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
AOS94443.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
glnEBifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...] (994 aa)
AOS91923.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
AOS91924.1LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
AOS91928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
lipALipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (313 aa)
lipBLipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (233 aa)
AOS91930.1TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
AOS92548.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
AOS92922.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
AOS92933.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
AOS92935.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
AOS92936.1dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
AOS92944.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)
AOS92962.2DNA repair ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
AOS93071.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (239 aa)
AOS93073.1Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. (298 aa)
APD84324.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (992 aa)
AOS93387.1PDZ domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
APD84325.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
AOS93410.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)
whiB-4WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (112 aa)
whiB3WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. (100 aa)
AOS94680.2Hemophore; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
Your Current Organism:
Mycobacterium chimaera
NCBI taxonomy Id: 222805
Other names: CCUG 50989, CIP 107892, DSM 44623, JCM 14737, M. chimaera, Mycobacterium chimaera Tortoli et al. 2004, NCTC 13781, personal::FI-01069, strain FI-01069
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