Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rpsE | rpsF | PSPTO_0643 | PSPTO_4933 | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rpsE | rpsI | PSPTO_0643 | PSPTO_4425 | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rpsE | rpsO | PSPTO_0643 | PSPTO_4487 | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
| rpsE | rpsP | PSPTO_0643 | PSPTO_1473 | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
| rpsF | rpsE | PSPTO_4933 | PSPTO_0643 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.997 |
| rpsF | rpsI | PSPTO_4933 | PSPTO_4425 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rpsF | rpsO | PSPTO_4933 | PSPTO_4487 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.993 |
| rpsF | rpsP | PSPTO_4933 | PSPTO_1473 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
| rpsI | rpsE | PSPTO_4425 | PSPTO_0643 | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
| rpsI | rpsF | PSPTO_4425 | PSPTO_4933 | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rpsI | rpsO | PSPTO_4425 | PSPTO_4487 | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.997 |
| rpsI | rpsP | PSPTO_4425 | PSPTO_1473 | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
| rpsO | rpsE | PSPTO_4487 | PSPTO_0643 | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.997 |
| rpsO | rpsF | PSPTO_4487 | PSPTO_4933 | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.993 |
| rpsO | rpsI | PSPTO_4487 | PSPTO_4425 | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rpsO | rpsP | PSPTO_4487 | PSPTO_1473 | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
| rpsP | rpsE | PSPTO_1473 | PSPTO_0643 | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.996 |
| rpsP | rpsF | PSPTO_1473 | PSPTO_4933 | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.997 |
| rpsP | rpsI | PSPTO_1473 | PSPTO_4425 | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | Ribosomal protein S9; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
| rpsP | rpsO | PSPTO_1473 | PSPTO_4487 | Ribosomal protein S16; See PMID:20190049 for expression data; Belongs to the bacterial ribosomal protein bS16 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |