STRINGSTRING
polS polS AAO53908.1 AAO53908.1 ugpC ugpC ugpE ugpE ugpA ugpA ugpB ugpB malK malK AAO54421.1 AAO54421.1 AAO54422.1 AAO54422.1 AAO54423.1 AAO54423.1 scrY scrY AAO54816.1 AAO54816.1 AAO54817.1 AAO54817.1 AAO54818.1 AAO54818.1 gltK gltK AAO56206.1 AAO56206.1 AAO56207.1 AAO56207.1 AAO56208.1 AAO56208.1 AAO57203.1 AAO57203.1 AAO57204.1 AAO57204.1 AAO57205.1 AAO57205.1 AAO57206.1 AAO57206.1 AAO57207.1 AAO57207.1 AAO57208.1 AAO57208.1 AAO57209.1 AAO57209.1 AAO57210.1 AAO57210.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polSSorbitol dehydrogenase; Similar to SP:Q59787, SP:P23157, GB:X55942, and PID:46921; identified by sequence similarity; putative. (257 aa)
AAO53908.1Sugar ABC transporter, periplasmic sugar-binding protein, putative; Similar to GP:2293414, GB:M77351, SP:P27756, and PID:153736; identified by sequence similarity; putative. (438 aa)
ugpCGlycerol-3-phosphate ABC transporter, ATP-binding protein; Similar to GP:15160309, and SP:P10907; identified by sequence similarity; putative; Belongs to the ABC transporter superfamily. (368 aa)
ugpEGlycerol-3-phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (297 aa)
ugpAGlycerol-3-phosphate ABC transporter, permease protein; Similar to GP:15160311, and SP:P10905; identified by sequence similarity; putative. (297 aa)
ugpBGlycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; Similar to GP:15160312, and SP:P10904; identified by sequence similarity; putative. (478 aa)
malKMaltose/maltodextrin ABC transporter, ATP-binding protein. (381 aa)
AAO54421.1Sugar ABC transporter, permease protein. (280 aa)
AAO54422.1Sugar ABC transporter, permease protein. (320 aa)
AAO54423.1Sugar ABC transporter, periplasmic sugar-binding protein; Similar to GP:15141174; identified by sequence similarity; putative. (424 aa)
scrYSucrose porin precursor; Similar to SP:P22340, GB:M28826, GB:M22168, GB:M22169, GB:M22170, GB:M22171, GB:M22172, GB:M22173, GB:M14665, SP:P29016, PID:180050, PID:180056, and PID:180064; identified by sequence similarity; putative. (540 aa)
AAO54816.1Glucose ABC transporter, periplasmic glucose-binding protein, putative; See PMID:20190049 for expression data. (428 aa)
AAO54817.1Glucose ABC transporter, permease protein, putative; See PMID:20190049 for expression data. (302 aa)
AAO54818.1Glucose ABC transporter, permease protein, putative; See PMID:20190049 for expression data. (281 aa)
gltKGlucose ABC transporter, ATP-binding protein; See PMID:20190049 for expression data; Belongs to the ABC transporter superfamily. (386 aa)
AAO56206.1Mannitol ABC transporter, permease protein; See PMID:20190049 for expression data. (277 aa)
AAO56207.1Mannitol ABC transporter, permease protein; See PMID:20190049 for expression data. (310 aa)
AAO56208.1Mannitol ABC transporter, periplasmic mannitol-binding protein; Similar to GP:2293414; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GP:2293414, identified by sequence similarity, putative. (440 aa)
AAO57203.1ISPsy6, transposase; Identified by match to PFAM protein family HMM PF01609. (486 aa)
AAO57204.1ABC transporter, periplasmic substrate-binding protein, putative; See PMID:20190049 for expression data; similar to GP:15159407; identified by sequence similarity; putative. (590 aa)
AAO57205.1Conserved hypothetical protein; Similar to GP:14021630, and GP:14021630; identified by sequence similarity; putative. (90 aa)
AAO57206.1ABC transporter, permease protein; Similar to GP:15159404; identified by sequence similarity; putative. (266 aa)
AAO57207.1ABC transporter, permease protein; Identified by match to TIGR protein family HMM TIGR01581. (288 aa)
AAO57208.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (371 aa)
AAO57209.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (364 aa)
AAO57210.1Sigma-54 dependent transcriptional regulator; Identified by match to PFAM protein family HMM PF02796. (617 aa)
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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