Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53694.1 | AAO57812.1 | PSPTO_0140 | PSPTO_4362 | Homoserine/homoserine lactone efflux protein; See PMID:20190049 for expression data. | Transporter, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | 0.451 |
| AAO53694.1 | rhtC | PSPTO_0140 | PSPTO_2958 | Homoserine/homoserine lactone efflux protein; See PMID:20190049 for expression data. | Threonine efflux protein; Similar to GP:6960243, and SP:P27846; identified by sequence similarity; putative. | 0.768 |
| AAO54676.1 | AAO54748.1 | PSPTO_1147 | PSPTO_1221 | Transporter, LysE family; See PMID:20190049 for expression data; similar to GP:15157837; identified by sequence similarity; putative. | Transporter, LysE family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948. | 0.787 |
| AAO54676.1 | AAO55403.1 | PSPTO_1147 | PSPTO_1885 | Transporter, LysE family; See PMID:20190049 for expression data; similar to GP:15157837; identified by sequence similarity; putative. | Efflux protein, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | 0.770 |
| AAO54676.1 | AAO56927.1 | PSPTO_1147 | PSPTO_3452 | Transporter, LysE family; See PMID:20190049 for expression data; similar to GP:15157837; identified by sequence similarity; putative. | Transporter, LysE family; Similar to GP:15075130; identified by sequence similarity; putative. | 0.446 |
| AAO54748.1 | AAO54676.1 | PSPTO_1221 | PSPTO_1147 | Transporter, LysE family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948. | Transporter, LysE family; See PMID:20190049 for expression data; similar to GP:15157837; identified by sequence similarity; putative. | 0.787 |
| AAO54748.1 | AAO57812.1 | PSPTO_1221 | PSPTO_4362 | Transporter, LysE family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948. | Transporter, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | 0.427 |
| AAO54748.1 | rhtC | PSPTO_1221 | PSPTO_2958 | Transporter, LysE family; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00948. | Threonine efflux protein; Similar to GP:6960243, and SP:P27846; identified by sequence similarity; putative. | 0.783 |
| AAO54783.1 | AAO58316.1 | PSPTO_1258 | PSPTO_4887 | Amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.402 |
| AAO54783.1 | AAO58607.1 | PSPTO_1258 | PSPTO_5181 | Amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | Cystine ABC transporter, permease protein, putative; See PMID:20190049 for expression data. | 0.835 |
| AAO55403.1 | AAO54676.1 | PSPTO_1885 | PSPTO_1147 | Efflux protein, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | Transporter, LysE family; See PMID:20190049 for expression data; similar to GP:15157837; identified by sequence similarity; putative. | 0.770 |
| AAO55403.1 | AAO56927.1 | PSPTO_1885 | PSPTO_3452 | Efflux protein, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | Transporter, LysE family; Similar to GP:15075130; identified by sequence similarity; putative. | 0.481 |
| AAO55403.1 | AAO57812.1 | PSPTO_1885 | PSPTO_4362 | Efflux protein, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | Transporter, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | 0.444 |
| AAO55403.1 | rhtC | PSPTO_1885 | PSPTO_2958 | Efflux protein, LysE family; Identified by match to TIGR protein family HMM TIGR00949. | Threonine efflux protein; Similar to GP:6960243, and SP:P27846; identified by sequence similarity; putative. | 0.773 |
| AAO55925.1 | AAO56478.1 | PSPTO_2416 | PSPTO_2986 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Branched-chain amino acid ABC transporter, ATP-binding protein. | 0.458 |
| AAO55925.1 | AAO56482.1 | PSPTO_2416 | PSPTO_2990 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Branched-chain amino acid ABC transporter, ATP-binding protein; Similar to GP:14025104, and GP:14025104; identified by sequence similarity; putative. | 0.458 |
| AAO55925.1 | AAO57533.1 | PSPTO_2416 | PSPTO_4076 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.904 |
| AAO55925.1 | AAO57565.1 | PSPTO_2416 | PSPTO_4109 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | High-affinity branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.431 |
| AAO55925.1 | AAO57567.1 | PSPTO_2416 | PSPTO_4111 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | High-affinity branched-chain amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data. | 0.520 |
| AAO55925.1 | AAO57568.1 | PSPTO_2416 | PSPTO_4112 | Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. | High-affinity amino acid ABC transporter, ATP-binding protein; See PMID:20190049 for expression data; Belongs to the ABC transporter superfamily. | 0.451 |
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