STRINGSTRING
gltP gltP madM madM AAO58444.1 AAO58444.1 AAO57833.1 AAO57833.1 AAO56669.1 AAO56669.1 AAO55562.1 AAO55562.1 trkH trkH AAO53672.1 AAO53672.1 AAO54490.1 AAO54490.1 AAO58919.1 AAO58919.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gltPProton/glutamate symporter; Catalyzes the proton-dependent transport of glutamate and aspartate; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. GltP subfamily. (443 aa)
madMMalonate transporter, MadM subunit; Similar to GP:4062981; identified by sequence similarity; putative. (254 aa)
AAO58444.1Proline permease; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (495 aa)
AAO57833.1ampG protein, putative; Similar to SP:P36670; identified by sequence similarity; putative. (516 aa)
AAO56669.1Sodium:solute symporter family protein; Similar to GB:L18881, GB:Z35446, GB:Z35447, GB:Z35448, GB:Z35450, GB:Z35454, SP:P48633, PID:408802, PID:516461, PID:516463, PID:516465, PID:516467, and PID:516469; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (509 aa)
AAO55562.1Transporter, putative. (389 aa)
trkHPotassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (484 aa)
AAO53672.1Na/Pi cotransporter family protein; See PMID:20190049 for expression data; similar to GB:L02320, SP:P35241, and PID:307366; identified by sequence similarity; putative. (550 aa)
AAO54490.1Phosphotransferase system, fructose-specific IIBC component; See PMID:20190049 for expression data. (584 aa)
AAO58919.1Sodium/alanine transporter; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03239. (483 aa)
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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