STRINGSTRING
AAO58490.1 AAO58490.1 AAO54427.1 AAO54427.1 AAO54869.1 AAO54869.1 AAO55144.1 AAO55144.1 AAO55240.1 AAO55240.1 AAO55549.1 AAO55549.1 AAO55857.1 AAO55857.1 AAO56774.1 AAO56774.1 AAO57039.1 AAO57039.1 AAO58542.1 AAO58542.1 gabP gabP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AAO58490.1Gluconate transporter family protein; Similar to GP:10197695; identified by sequence similarity; putative. (485 aa)
AAO54427.1Outer membrane protein P1, putative; Similar to GP:9716567; identified by sequence similarity; putative. (422 aa)
AAO54869.1Identified by match to PFAM protein family HMM PF03222. (448 aa)
AAO55144.1Sodium:solute symporter family protein; See PMID:20190049 for expression data; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (552 aa)
AAO55240.1Outer membrane protein; Identified by match to PFAM protein family HMM PF03349; see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF03349. (424 aa)
AAO55549.1Benzoate transport C-terminal domain protein. (163 aa)
AAO55857.1Transporter, putative; See PMID:20190049 for expression data; similar to GP:12658422; identified by sequence similarity; putative. (439 aa)
AAO56774.1Transporter, putative; See PMID:20190049 for expression data; similar to GB:X04143, SP:P02818, and PID:29450; identified by sequence similarity; putative. (311 aa)
AAO57039.1Gluconate permease; See PMID:20190049 for expression data. (450 aa)
AAO58542.1Gluconate transporter family protein; Similar to SP:P39835; identified by sequence similarity; putative. (449 aa)
gabPGamma-aminobutyrate permease; Similar to SP:P25527, GB:X53331, GB:X07362, GB:M55270, GB:M58549, SP:P08493, PID:187591, PID:187593, PID:34614, and PID:34618; identified by sequence similarity; putative. (463 aa)
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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