STRINGSTRING
AAO56135.1 AAO56135.1 metC-1 metC-1 metC-2 metC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AAO56135.1Rhodanese domain protein/cystathionine beta-lyase; See PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR00858. (931 aa)
metC-1Cystathionine beta-lyase; See PMID:20190049 for expression data; similar to SP:P06721; identified by sequence similarity; putative. (388 aa)
metC-2Cystathionine beta-lyase; Similar to SP:P06721; identified by sequence similarity; putative. (389 aa)
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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