(6 nodes) Glutamine synthetase/guanido kinase, catalytic domain network (Pseudomonas syringae tomato)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gshA	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (529 aa)
	AAO58735.1	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family. (452 aa)
	AAO58736.1	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family. (458 aa)
	glnA-1	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692. (468 aa)
	AAO55439.1	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family. (447 aa)
	gatB	glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (481 aa)

Your Current Organism:

Pseudomonas syringae tomato

NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAO55439.1	AAO58735.1	PSPTO_1921	PSPTO_5309	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.823
AAO55439.1	AAO58736.1	PSPTO_1921	PSPTO_5310	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.849
AAO55439.1	glnA-1	PSPTO_1921	PSPTO_0359	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.856
AAO55439.1	gshA	PSPTO_1921	PSPTO_0325	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	0.815
AAO58735.1	AAO55439.1	PSPTO_5309	PSPTO_1921	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	0.823
AAO58735.1	AAO58736.1	PSPTO_5309	PSPTO_5310	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.846
AAO58735.1	glnA-1	PSPTO_5309	PSPTO_0359	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.850
AAO58735.1	gshA	PSPTO_5309	PSPTO_0325	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	0.815
AAO58736.1	AAO55439.1	PSPTO_5310	PSPTO_1921	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	0.849
AAO58736.1	AAO58735.1	PSPTO_5310	PSPTO_5309	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.846
AAO58736.1	glnA-1	PSPTO_5310	PSPTO_0359	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.844
AAO58736.1	gshA	PSPTO_5310	PSPTO_0325	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	0.815
glnA-1	AAO55439.1	PSPTO_0359	PSPTO_1921	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	0.856
glnA-1	AAO58735.1	PSPTO_0359	PSPTO_5309	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.850
glnA-1	AAO58736.1	PSPTO_0359	PSPTO_5310	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.844
glnA-1	gshA	PSPTO_0359	PSPTO_0325	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	0.815
gshA	AAO55439.1	PSPTO_0325	PSPTO_1921	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	Glutamine synthetase; Identified by match to TIGR protein family HMM TIGR00653; Belongs to the glutamine synthetase family.	0.815
gshA	AAO58735.1	PSPTO_0325	PSPTO_5309	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.815
gshA	AAO58736.1	PSPTO_0325	PSPTO_5310	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	Glutamine synthetase; See PMID:20190049 for expression data; Belongs to the glutamine synthetase family.	0.815
gshA	glnA-1	PSPTO_0325	PSPTO_0359	Glutamate--cysteine ligase; See PMID:20190049 for expression data; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.	Glutamine synthetase, type I; Identified by match to TIGR protein family HMM TIGR01692; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01692.	0.815

Server load: medium (46%) [HD]

Permalink

Network

Neighborhood

Databases

Cooccurrence

Textmining

Coexpression

Experiments

Fusion

© STRING Consortium 2025

Credits

Access

Info

About