Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AAO53954.1 | AAO55360.1 | PSPTO_0410 | PSPTO_1841 | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | 0.900 |
| AAO53954.1 | AAO55936.1 | PSPTO_0410 | PSPTO_2427 | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | 0.916 |
| AAO53954.1 | gcvP | PSPTO_0410 | PSPTO_1276 | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.951 |
| AAO53954.1 | glyA-1 | PSPTO_0410 | PSPTO_0461 | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| AAO53954.1 | glyA-2 | PSPTO_0410 | PSPTO_4632 | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.916 |
| AAO54316.1 | bioF | PSPTO_0774 | PSPTO_0495 | Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.515 |
| AAO54316.1 | gabT-1 | PSPTO_0774 | PSPTO_0259 | Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.926 |
| AAO55051.1 | argD-2 | PSPTO_1531 | PSPTO_2618 | Aminotransferase, classes I and II; See PMID:20190049 for expression data. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.905 |
| AAO55299.1 | aspB | PSPTO_1779 | PSPTO_2925 | Aminotransferase, classes I and II; See PMID:20190049 for expression data. | Aspartate aminotransferase; Similar to SP:P53001; identified by sequence similarity; putative. | 0.900 |
| AAO55360.1 | AAO53954.1 | PSPTO_1841 | PSPTO_0410 | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.900 |
| AAO55360.1 | AAO55936.1 | PSPTO_1841 | PSPTO_2427 | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | 0.915 |
| AAO55360.1 | gcvP | PSPTO_1841 | PSPTO_1276 | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.951 |
| AAO55360.1 | glyA-1 | PSPTO_1841 | PSPTO_0461 | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.915 |
| AAO55360.1 | glyA-2 | PSPTO_1841 | PSPTO_4632 | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.915 |
| AAO55672.1 | daT | PSPTO_2155 | PSPTO_2136 | Aminotransferase, class V; See PMID:20190049 for expression data; similar to GP:13506638; identified by sequence similarity; putative. | 2,4-diaminobutyrate 4-transaminase; Catalyzes the conversion of aspartate semialdehyde (an intermediate in the biosynthesis of various amino acids) to 2,4-diaminobutyrate (DAB). It is unclear whether the partner for this converison is alanine or glutamate. DAB is required for the biosynthesis of the pyoverdine chromophore, and this gene is located whithin the pyoverdine gene cluster; similar to SP:P56744; identified by sequence similarity; putative; see PMID:20190049 for expression data; Catalyzes the conversion of aspartate semialdehyde (an intermediate in the biosynthesis of various [...] | 0.671 |
| AAO55936.1 | AAO53954.1 | PSPTO_2427 | PSPTO_0410 | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | Threonine aldolase, low-specificity; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. | 0.916 |
| AAO55936.1 | AAO55360.1 | PSPTO_2427 | PSPTO_1841 | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | Threonine aldolase, low-specificity; See PMID:20190049 for expression data; similar to SP:P75823; identified by sequence similarity; putative. | 0.915 |
| AAO55936.1 | gcvP | PSPTO_2427 | PSPTO_1276 | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.994 |
| AAO55936.1 | glyA-1 | PSPTO_2427 | PSPTO_0461 | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.913 |
| AAO55936.1 | glyA-2 | PSPTO_2427 | PSPTO_4632 | Serine hydroxymethyltransferase, putative; Similar to GB:Z35428, PID:515905, and SP:P53522; identified by sequence similarity; putative. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.915 |
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