STRINGSTRING
AAO53794.1 AAO53794.1 mqo mqo trxB trxB mnmC mnmC AAO55410.1 AAO55410.1 pobA pobA sthA sthA sdhA sdhA lpdA lpdA AAO55816.1 AAO55816.1 AAO55947.1 AAO55947.1 soxA-2 soxA-2 soxB-2 soxB-2 AAO56026.1 AAO56026.1 AAO56027.1 AAO56027.1 AAO56148.1 AAO56148.1 AAO56196.1 AAO56196.1 AAO56309.1 AAO56309.1 AAO56453.1 AAO56453.1 AAO56455.1 AAO56455.1 AAO56499.1 AAO56499.1 AAO56554.1 AAO56554.1 ahpF ahpF gor-1 gor-1 nirB nirB AAO56805.1 AAO56805.1 AAO56943.1 AAO56943.1 AAO57041.1 AAO57041.1 fadH fadH AAO57570.1 AAO57570.1 glpD glpD nadB nadB gor-2 gor-2 AAO58109.1 AAO58109.1 hopAD1 hopAD1 AAO58408.1 AAO58408.1 AAO58436.1 AAO58436.1 AAO58501.1 AAO58501.1 AAO58531.1 AAO58531.1 gltD gltD ubiF ubiF ubiH ubiH rubB rubB gidA gidA AAO54655.1 AAO54655.1 AAO54647.1 AAO54647.1 ndH ndH AAO54359.1 AAO54359.1 AAO54061.1 AAO54061.1 soxB-1 soxB-1 soxA-1 soxA-1 betA betA AAO53940.1 AAO53940.1 AAO53844.1 AAO53844.1 AAO53801.1 AAO53801.1 AAO53800.1 AAO53800.1 iucD iucD AAO53663.1 AAO53663.1 dadA dadA AAO53652.1 AAO53652.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AAO53794.1Oxidoreductase, FAD-binding protein; Similar to GP:14524166; identified by sequence similarity; putative. (424 aa)
mqoMalate:quinone oxidoreductase; See PMID:20190049 for expression data. (502 aa)
trxBThioredoxin reductase; Identified by match to TIGR protein family HMM TIGR01812; see PMID:20190049 for expression data; identified by match to TIGR protein family HMM TIGR01812. (320 aa)
mnmCOxidoreductase, FAD-binding protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. (660 aa)
AAO55410.1Conserved hypothetical protein; Similar to GP:15157750; identified by sequence similarity; putative. (429 aa)
pobAP-hydroxybenzoate hydroxylase. (394 aa)
sthASoluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (464 aa)
sdhASuccinate dehydrogenase, flavoprotein subunit; Similar to SP:P10444, GB:D12485, GB:M57736, SP:P22413, PID:189650, PID:219944, and PID:219945; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to SP:P10444, GB:D12485, GB:M57736, SP:P22413, PID:189650, PID:219944, and PID:219945, identified by sequence similarity, putative; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
lpdA2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase; See PMID:20190049 for expression data. (478 aa)
AAO55816.1Assimilatory nitrate reductase electron transfer subunit domain protein; Similar to GP:15159393, and SP:P42435; identified by sequence similarity; putative. (409 aa)
AAO55947.1Amine oxidase, flavin-containing protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01494. (507 aa)
soxA-2Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family. (968 aa)
soxB-2Sarcosine oxidase, beta subunit; Similar to SP:P40875; identified by sequence similarity; putative. (413 aa)
AAO56026.1Oxidoreductase, FAD-binding protein; Similar to GP:2665709; identified by sequence similarity; putative. (394 aa)
AAO56027.1Pyridine nucleotide-disulfide oxidoreductase family protein; Similar to GP:14026612, and SP:P72300; identified by sequence similarity; putative. (463 aa)
AAO56148.1FAD-binding monooxygenase, PheA/TfdB family; Similar to GP:11544755, and SP:P42535; identified by sequence similarity; putative. (529 aa)
AAO56196.1Conserved hypothetical protein; Similar to SP:P37906; identified by sequence similarity; putative. (427 aa)
AAO56309.1Conserved hypothetical protein; Similar to GP:15140142; identified by sequence similarity; putative. (486 aa)
AAO56453.1L-lysine 6-monooxygenase, putative; Similar to GP:11037217, and SP:P11295; identified by sequence similarity; putative. (440 aa)
AAO56455.1Oxidoreductase, FAD-binding protein; Identified by match to TIGR protein family HMM TIGR01377. (379 aa)
AAO56499.1Amine oxidase, flavin-containing protein; Similar to GB:M79446, SP:P24182, GB:M83198, PID:145175, PID:145893, PID:145896, PID:606196, GB:U00096, and PID:1789654; identified by sequence similarity; putative. (527 aa)
AAO56554.1Conserved hypothetical protein; Identified by Glimmer2; putative. (448 aa)
ahpFAlkyl hydroperoxide reductase, subunit F; See PMID:20190049 for expression data; similar to SP:P35340; identified by sequence similarity; putative. (520 aa)
gor-1Glutathione reductase; See PMID:20190049 for expression data. (452 aa)
nirBNitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (853 aa)
AAO56805.1Sarcosine oxidase; Similar to SP:P23342, and SP:P23342; identified by sequence similarity; putative. (391 aa)
AAO56943.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to GP:9478255, and GP:17984964; identified by sequence similarity; putative. (467 aa)
AAO57041.1Hypothetical protein; Identified by Glimmer2; putative. (466 aa)
fadH2,4-dienoyl-CoA reductase; Similar to GP:9716173, and SP:P42593; identified by sequence similarity; putative. (679 aa)
AAO57570.1Conserved protein of unknown function; Similar to GB:X59710, GB:L06145, SP:P25208, PID:189199, PID:35050, and PID:579588; identified by sequence similarity; putative; see PMID:20190049 for expression data; similar to GB:X59710, GB:L06145, SP:P25208, PID:189199, PID:35050, and PID:579588, identified by sequence similarity, putative. (537 aa)
glpDGlycerol-3-phosphate dehydrogenase; See PMID:20190049 for expression data; similar to SP:O83004; identified by sequence similarity; putative; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (512 aa)
nadBL-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (538 aa)
gor-2Glutathione reductase; Maintains high levels of reduced glutathione. (466 aa)
AAO58109.1Conserved hypothetical protein. (412 aa)
hopAD1Type III effector HopAD1; Previously known as HolPtoS (PMID11872842; Guttman et al, 2002) and HopPtoI (PMID12032338; Petnicki-Ocwieja et al, 2002); see PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF02918. (632 aa)
AAO58408.1Oxidoreductase, FAD-binding protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01266. (391 aa)
AAO58436.1Conserved hypothetical protein TIGR00275. (392 aa)
AAO58501.1Amine oxidase, flavin-containing protein; See PMID:20190049 for expression data. (625 aa)
AAO58531.1Conserved hypothetical protein; Similar to GP:15055554, and GP:17430823; identified by sequence similarity; putative. (415 aa)
gltDGlutamate synthase, small subunit; See PMID:20190049 for expression data. (472 aa)
ubiF2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; See PMID:20190049 for expression data. (409 aa)
ubiH2-octaprenyl-6-methoxyphenyl hydroxylase; See PMID:20190049 for expression data. (395 aa)
rubBRubredoxin reductase; See PMID:20190049 for expression data; Belongs to the FAD-dependent oxidoreductase family. (382 aa)
gidAGlucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (630 aa)
AAO54655.1Amine oxidase, flavin-containing protein; Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. Has a preference for 1,2-dihydro-beta-NAD as substrate. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2- dihydro- and 1,6-dihydro-beta-NAD(P) isomers. Belongs to the bacterial renalase family. (328 aa)
AAO54647.1Amine oxidase, flavin-containing protein; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF01593. (415 aa)
ndHNADH dehydrogenase; See PMID:20190049 for expression data. (432 aa)
AAO54359.1Oxidoreductase, FAD-binding protein; See PMID:20190049 for expression data. (367 aa)
AAO54061.1Tryptophan 2-monooxygenase, putative; See PMID:20190049 for expression data. (544 aa)
soxB-1Sarcosine oxidase, beta subunit; Similar to GP:14023472, and SP:P40875; identified by sequence similarity; putative. (416 aa)
soxA-1Sarcosine oxidase, alpha subunit; Similar to SP:Q46337; identified by sequence similarity; putative; Belongs to the GcvT family. (1006 aa)
betACholine dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (568 aa)
AAO53940.1NADH:flavin oxidoreductase/NADH oxidase family protein. (686 aa)
AAO53844.1Monooxygenase; Similar to GP:5763911; identified by sequence similarity; putative. (351 aa)
AAO53801.1Oxidoreductase, FAD-binding protein; Similar to GP:2665709; identified by sequence similarity; putative. (384 aa)
AAO53800.1Pyridine nucleotide-disulfide oxidoreductase family protein; Similar to GP:14026612, and SP:P72300; identified by sequence similarity; putative. (469 aa)
iucDL-lysine 6-monooxygenase; Similar to SP:P11295; identified by sequence similarity; putative. (427 aa)
AAO53663.1Conserved hypothetical protein; Identified by match to PFAM protein family HMM PF00070. (417 aa)
dadAD-amino acid dehydrogenase, small subunit; Oxidative deamination of D-amino acids. (433 aa)
AAO53652.1Conserved protein of unknown function; See PMID:20190049 for expression data; similar to SP:P37906; identified by sequence similarity; putative. (437 aa)
Your Current Organism:
Pseudomonas syringae tomato
NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000
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