(15 nodes) Solute-binding protein family 5 network (Pseudomonas syringae tomato)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	AAO57185.1	ABC transporter, periplasmic substrate-binding protein. (609 aa)
	AAO57186.1	ABC transporter, periplasmic substrate-binding protein; See PMID:20190049 for expression data. (618 aa)
	AAO57982.1	Peptide ABC transporter, periplasmic peptide-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496. (504 aa)
	AAO58005.1	Peptide ABC transporter, periplasmic peptide-binding protein; See PMID:20190049 for expression data; similar to SP:P23847; identified by sequence similarity; putative. (535 aa)
	AAO58006.1	Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative; See PMID:20190049 for expression data; similar to SP:P23847; identified by sequence similarity; putative. (540 aa)
	dppA	Dipeptide ABC transporter, periplasmic dipeptide-binding protein; See PMID:20190049 for expression data. (531 aa)
	AAO58007.1	Dipeptide ABC transporter, periplasmic dipeptide-binding protein; Similar to SP:P23847; identified by sequence similarity; putative. (530 aa)
	AAO53641.1	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496. (528 aa)
	AAO53795.1	Peptide ABC transporter, periplasmic peptide-binding protein. (545 aa)
	AAO53813.1	Bacterial extracellular solute-binding protein, family 5. (638 aa)
	AAO56081.1	Peptide ABC transporter, periplasmic peptide-binding protein. (506 aa)
	AAO56313.1	Peptide ABC transporter, periplasmic peptide-binding protein; Similar to GP:15140494, and SP:P23847; identified by sequence similarity; putative. (521 aa)
	AAO56519.1	Peptide ABC transporter, periplasmic peptide-binding protein. (622 aa)
	AAO56577.1	Nickel ABC transporter, periplasmic nickel-binding protein, putative. (542 aa)
	AAO56727.1	Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative. (540 aa)

Your Current Organism:

Pseudomonas syringae tomato

NCBI taxonomy Id: 223283
Other names: P. syringae pv. tomato str. DC3000, Pseudomonas syringae DC3000, Pseudomonas syringae pv. tomato DC3000, Pseudomonas syringae pv. tomato str. ATCC BAA-871, Pseudomonas syringae pv. tomato str. DC3000

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAO53641.1	AAO53795.1	PSPTO_0087	PSPTO_0249	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Peptide ABC transporter, periplasmic peptide-binding protein.	0.447
AAO53641.1	AAO56081.1	PSPTO_0087	PSPTO_2576	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Peptide ABC transporter, periplasmic peptide-binding protein.	0.493
AAO53641.1	AAO56313.1	PSPTO_0087	PSPTO_2814	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Peptide ABC transporter, periplasmic peptide-binding protein; Similar to GP:15140494, and SP:P23847; identified by sequence similarity; putative.	0.402
AAO53641.1	AAO56577.1	PSPTO_0087	PSPTO_3088	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Nickel ABC transporter, periplasmic nickel-binding protein, putative.	0.464
AAO53641.1	AAO56727.1	PSPTO_0087	PSPTO_3248	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative.	0.506
AAO53641.1	AAO57982.1	PSPTO_0087	PSPTO_4534	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Peptide ABC transporter, periplasmic peptide-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	0.524
AAO53641.1	AAO58007.1	PSPTO_0087	PSPTO_4559	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein; Similar to SP:P23847; identified by sequence similarity; putative.	0.400
AAO53795.1	AAO53641.1	PSPTO_0249	PSPTO_0087	Peptide ABC transporter, periplasmic peptide-binding protein.	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	0.447
AAO53795.1	AAO56081.1	PSPTO_0249	PSPTO_2576	Peptide ABC transporter, periplasmic peptide-binding protein.	Peptide ABC transporter, periplasmic peptide-binding protein.	0.524
AAO53795.1	AAO56313.1	PSPTO_0249	PSPTO_2814	Peptide ABC transporter, periplasmic peptide-binding protein.	Peptide ABC transporter, periplasmic peptide-binding protein; Similar to GP:15140494, and SP:P23847; identified by sequence similarity; putative.	0.454
AAO53795.1	AAO56577.1	PSPTO_0249	PSPTO_3088	Peptide ABC transporter, periplasmic peptide-binding protein.	Nickel ABC transporter, periplasmic nickel-binding protein, putative.	0.442
AAO53795.1	AAO56727.1	PSPTO_0249	PSPTO_3248	Peptide ABC transporter, periplasmic peptide-binding protein.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative.	0.515
AAO53795.1	AAO57982.1	PSPTO_0249	PSPTO_4534	Peptide ABC transporter, periplasmic peptide-binding protein.	Peptide ABC transporter, periplasmic peptide-binding protein, putative; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	0.466
AAO53795.1	AAO58005.1	PSPTO_0249	PSPTO_4557	Peptide ABC transporter, periplasmic peptide-binding protein.	Peptide ABC transporter, periplasmic peptide-binding protein; See PMID:20190049 for expression data; similar to SP:P23847; identified by sequence similarity; putative.	0.435
AAO53795.1	AAO58006.1	PSPTO_0249	PSPTO_4558	Peptide ABC transporter, periplasmic peptide-binding protein.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein, putative; See PMID:20190049 for expression data; similar to SP:P23847; identified by sequence similarity; putative.	0.431
AAO53795.1	AAO58007.1	PSPTO_0249	PSPTO_4559	Peptide ABC transporter, periplasmic peptide-binding protein.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein; Similar to SP:P23847; identified by sequence similarity; putative.	0.436
AAO53795.1	dppA	PSPTO_0249	PSPTO_4561	Peptide ABC transporter, periplasmic peptide-binding protein.	Dipeptide ABC transporter, periplasmic dipeptide-binding protein; See PMID:20190049 for expression data.	0.447
AAO53813.1	AAO57185.1	PSPTO_0267	PSPTO_3716	Bacterial extracellular solute-binding protein, family 5.	ABC transporter, periplasmic substrate-binding protein.	0.452
AAO56081.1	AAO53641.1	PSPTO_2576	PSPTO_0087	Peptide ABC transporter, periplasmic peptide-binding protein.	Bacterial extracellular solute-binding protein, family 5; See PMID:20190049 for expression data; identified by match to PFAM protein family HMM PF00496.	0.493
AAO56081.1	AAO53795.1	PSPTO_2576	PSPTO_0249	Peptide ABC transporter, periplasmic peptide-binding protein.	Peptide ABC transporter, periplasmic peptide-binding protein.	0.524

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