Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| argI | rocB | BSU40320 | BSU37770 | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | 0.662 |
| argI | rocC | BSU40320 | BSU37760 | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.716 |
| argI | rocD | BSU40320 | BSU40340 | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | 0.999 |
| argI | rocE | BSU40320 | BSU40330 | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | Arginine/ornithine/gamma-aminobutyrate permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.989 |
| argI | rocR | BSU40320 | BSU40350 | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | Transcriptional regulator (NtrC/NifA family); Positive regulator of arginine catabolism. Controls the transcription of the two operons rocABC and rocDEF and probably acts by binding to the corresponding upstream activating sequences. | 0.772 |
| rocB | argI | BSU37770 | BSU40320 | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | 0.662 |
| rocB | rocC | BSU37770 | BSU37760 | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.994 |
| rocB | rocD | BSU37770 | BSU40340 | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | 0.810 |
| rocB | rocE | BSU37770 | BSU40330 | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | Arginine/ornithine/gamma-aminobutyrate permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.819 |
| rocB | rocR | BSU37770 | BSU40350 | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | Transcriptional regulator (NtrC/NifA family); Positive regulator of arginine catabolism. Controls the transcription of the two operons rocABC and rocDEF and probably acts by binding to the corresponding upstream activating sequences. | 0.766 |
| rocC | argI | BSU37760 | BSU40320 | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | 0.716 |
| rocC | rocB | BSU37760 | BSU37770 | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | 0.994 |
| rocC | rocD | BSU37760 | BSU40340 | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | 0.744 |
| rocC | rocR | BSU37760 | BSU40350 | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | Transcriptional regulator (NtrC/NifA family); Positive regulator of arginine catabolism. Controls the transcription of the two operons rocABC and rocDEF and probably acts by binding to the corresponding upstream activating sequences. | 0.751 |
| rocD | argI | BSU40340 | BSU40320 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | 0.999 |
| rocD | rocB | BSU40340 | BSU37770 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | Putative N-deacylase involved in arginine and ornithine utilization; Involved in arginine degradative pathway. | 0.810 |
| rocD | rocC | BSU40340 | BSU37760 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | Arginine/ornithine permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.744 |
| rocD | rocE | BSU40340 | BSU40330 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | Arginine/ornithine/gamma-aminobutyrate permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | 0.987 |
| rocD | rocR | BSU40340 | BSU40350 | Ornithine aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. Controls arginine catabolism. | Transcriptional regulator (NtrC/NifA family); Positive regulator of arginine catabolism. Controls the transcription of the two operons rocABC and rocDEF and probably acts by binding to the corresponding upstream activating sequences. | 0.885 |
| rocE | argI | BSU40330 | BSU40320 | Arginine/ornithine/gamma-aminobutyrate permease; Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine. | Arginase; Involved in the catabolism of arginine. Belongs to the arginase family. | 0.989 |
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