STRINGSTRING
sscA sscA yhzC yhzC yopA yopA yonX yonX yonV yonV yonU yonU yoyJ yoyJ yonT yonT yonS yonS bsrG bsrG txpA txpA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sscASpore assembly and germination protein; Spore protein involved in the assembly of several components of the spore coat, including CotB, CotG and CotH, and in spore germination. (28 aa)
yhzCHypothetical protein; Evidence 5: No homology to any previously reported sequences. (77 aa)
yopAPutative methyltransferase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme. (438 aa)
yonXConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (168 aa)
yonVConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (410 aa)
yonUHypothetical protein; Evidence 5: No homology to any previously reported sequences. (62 aa)
yoyJHypothetical protein; Evidence 5: No homology to any previously reported sequences. (83 aa)
yonTHypothetical protein; Evidence 5: No homology to any previously reported sequences. (58 aa)
yonSPutative glycosyl hydrolase lipoprotein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pe: putative enzyme. (203 aa)
bsrGPhage toxin; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type m: membrane component. (38 aa)
txpAConserved unknown protein (fragment); Toxic component of a type I toxin-antitoxin (TA) system. Overexpression of txpA causes cell lysis; the TxpA protein has been suggested to act on the cell membrane or might possibly block cell wall synthesis. Overexpression in E.coli is not toxic. (59 aa)
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
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