STRINGSTRING
yobB yobB yobF yobF yozW yozW yozX yozX yozJ yozJ yozY yozY yobI yobI yobJ yobJ yrkL yrkL yrkK yrkK ytzJ ytzJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yobBPutative phage protein; Evidence 7: Gene remnant; extrachromosomal origin. (87 aa)
yobFConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (307 aa)
yozWHypothetical protein; Evidence 5: No homology to any previously reported sequences. (57 aa)
yozXPutative phage protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h: extrachromosomal origin. (74 aa)
yozJHypothetical protein; Evidence 5: No homology to any previously reported sequences. (151 aa)
yozYPutative transcriptional regulator from bacteriophage; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type h: extrachromosomal origin. (86 aa)
yobIPutative NTPase with transmembrane helices; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1201 aa)
yobJSmall regulatory RNA; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type n: RNA. (280 aa)
yrkLPutative NAD(P)H oxidoreductase; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the NAD(P)H dehydrogenase (quinone) family. (174 aa)
yrkKPutative integral inner membrane protein; Evidence 3: Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pm: putative membrane component. (158 aa)
ytzJConserved hypothetical protein; Evidence 4: Homologs of previously reported genes of unknown function. (63 aa)
Your Current Organism:
Bacillus subtilis 168
NCBI taxonomy Id: 224308
Other names: B. subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis 168, Bacillus subtilis subsp. subtilis str. 168, Bacillus subtilis subsp. subtilis str. BGSC 1A700
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.