Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cotB | cotC | BSU36050 | BSU17700 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.980 |
| cotB | cotG | BSU36050 | BSU36070 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | 0.993 |
| cotB | cotU | BSU36050 | BSU17670 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.913 |
| cotB | gerE | BSU36050 | BSU28410 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Transcriptional regulator; Involved in the regulation of spore formation. Directs the transcription of several genes that encode structural components of the protein coat that encases the mature spore (CotB, CotC, CotG, CotS, CotV, CotW, CotX, CotY and CotZ). Controls also the cgeAB and cgeCDE operons. | 0.869 |
| cotB | spoIIID | BSU36050 | BSU36420 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Transcriptional regulator; This protein regulates the transcription of sigK, which encodes mother cell chamber RNA polymerase sigma-factor (sigma K). | 0.670 |
| cotB | spoVIF | BSU36050 | BSU11810 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Sporulation-specific protein needed for heat resistance; Transcription factor involved in spore coat assembly and spore resistance. Regulates the transcription of at least cgeA, cotG and cotS. | 0.771 |
| cotC | cotB | BSU17700 | BSU36050 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.980 |
| cotC | cotG | BSU17700 | BSU36070 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | 0.984 |
| cotC | cotU | BSU17700 | BSU17670 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.993 |
| cotC | gerE | BSU17700 | BSU28410 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Transcriptional regulator; Involved in the regulation of spore formation. Directs the transcription of several genes that encode structural components of the protein coat that encases the mature spore (CotB, CotC, CotG, CotS, CotV, CotW, CotX, CotY and CotZ). Controls also the cgeAB and cgeCDE operons. | 0.912 |
| cotC | spoIIID | BSU17700 | BSU36420 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Transcriptional regulator; This protein regulates the transcription of sigK, which encodes mother cell chamber RNA polymerase sigma-factor (sigma K). | 0.689 |
| cotC | spoVIF | BSU17700 | BSU11810 | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | Sporulation-specific protein needed for heat resistance; Transcription factor involved in spore coat assembly and spore resistance. Regulates the transcription of at least cgeA, cotG and cotS. | 0.580 |
| cotG | cotB | BSU36070 | BSU36050 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.993 |
| cotG | cotC | BSU36070 | BSU17700 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.984 |
| cotG | cotU | BSU36070 | BSU17670 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | 0.922 |
| cotG | gerE | BSU36070 | BSU28410 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Transcriptional regulator; Involved in the regulation of spore formation. Directs the transcription of several genes that encode structural components of the protein coat that encases the mature spore (CotB, CotC, CotG, CotS, CotV, CotW, CotX, CotY and CotZ). Controls also the cgeAB and cgeCDE operons. | 0.857 |
| cotG | gerR | BSU36070 | BSU15090 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | DNA-binding regulator; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type r: regulator. | 0.485 |
| cotG | spoVIF | BSU36070 | BSU11810 | Spore morphogenetic protein; May be a morphogenetic protein that is required for the incorporation of protein CotB into the spore coat. | Sporulation-specific protein needed for heat resistance; Transcription factor involved in spore coat assembly and spore resistance. Regulates the transcription of at least cgeA, cotG and cotS. | 0.911 |
| cotU | cotB | BSU17670 | BSU36050 | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.913 |
| cotU | cotC | BSU17670 | BSU17700 | Spore coat protein; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type f: factor. | Spore coat protein (outer); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type s: structure. | 0.993 |
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