Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acdA | fadE | BSU37170 | BSU32820 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | 0.699 |
| acdA | fadR | BSU37170 | BSU28550 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | 0.862 |
| acdA | lcfA | BSU37170 | BSU28560 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | 0.890 |
| acdA | lcfB | BSU37170 | BSU10270 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | Long-chain fatty-acid-CoA ligase (degradative); Involved in the degradation of long-chain fatty acids; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.952 |
| acdA | mmgA | BSU37170 | BSU24170 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | Degradative acetoacetyl-CoA thiolase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the thiolase-like superfamily. Thiolase family. | 0.717 |
| acdA | yhfS | BSU37170 | BSU10350 | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | Putative acetyl-CoA C-acetyltransferase; May be involved in fatty acid metabolism; Belongs to the thiolase-like superfamily. Thiolase family. | 0.704 |
| fadE | acdA | BSU32820 | BSU37170 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | 0.699 |
| fadE | fadR | BSU32820 | BSU28550 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | 0.925 |
| fadE | lcfA | BSU32820 | BSU28560 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | 0.920 |
| fadE | lcfB | BSU32820 | BSU10270 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | Long-chain fatty-acid-CoA ligase (degradative); Involved in the degradation of long-chain fatty acids; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.955 |
| fadE | mmgA | BSU32820 | BSU24170 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | Degradative acetoacetyl-CoA thiolase; Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme; Belongs to the thiolase-like superfamily. Thiolase family. | 0.687 |
| fadE | yhfS | BSU32820 | BSU10350 | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | Putative acetyl-CoA C-acetyltransferase; May be involved in fatty acid metabolism; Belongs to the thiolase-like superfamily. Thiolase family. | 0.673 |
| fadR | acdA | BSU28550 | BSU37170 | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | 0.862 |
| fadR | fadE | BSU28550 | BSU32820 | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | 0.925 |
| fadR | lcfA | BSU28550 | BSU28560 | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | 0.972 |
| fadR | lcfB | BSU28550 | BSU10270 | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | Long-chain fatty-acid-CoA ligase (degradative); Involved in the degradation of long-chain fatty acids; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.891 |
| lcfA | acdA | BSU28560 | BSU37170 | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | acyl-CoA dehydrogenase; Involved in the degradation of long-chain fatty acids. | 0.890 |
| lcfA | fadE | BSU28560 | BSU32820 | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | acyl-CoA dehydrogenase (FAD dependent); Involved in the degradation of long-chain fatty acids. | 0.920 |
| lcfA | fadR | BSU28560 | BSU28550 | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | Transcriptional regulator of fatty acids degradation (TetR/AcrR family); Transcriptional regulator in fatty acid degradation. Represses transcription of genes required for fatty acid transport and beta-oxidation, including acdA, fadA, fadB, fadE, fadF, fadG, fadH, fadM, fadN, lcfA and lcfB. Binding of FadR to DNA is specifically inhibited by long chain fatty acyl-CoA compounds of 14-20 carbon atoms in length. | 0.972 |
| lcfA | lcfB | BSU28560 | BSU10270 | Long chain acyl-CoA ligase (degradative); Evidence 1a: Function experimentally demonstrated in the studied strain; Product type e: enzyme. | Long-chain fatty-acid-CoA ligase (degradative); Involved in the degradation of long-chain fatty acids; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.935 |
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