Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| comEA | comEC | BSU25590 | BSU25570 | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | 0.999 |
| comEA | comGA | BSU25590 | BSU24730 | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | 0.996 |
| comEA | comGB | BSU25590 | BSU24720 | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | 0.987 |
| comEA | comGC | BSU25590 | BSU24710 | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | Pilin-like component of the DNA transport membrane platform; Required for transformation and DNA binding. Belongs to the ComGC family. | 0.983 |
| comEA | comGG | BSU25590 | BSU24670 | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | Component of the DNA transport platform; Required for transformation and DNA binding. | 0.927 |
| comEC | comEA | BSU25570 | BSU25590 | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | 0.999 |
| comEC | comGA | BSU25570 | BSU24730 | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | 0.990 |
| comEC | comGB | BSU25570 | BSU24720 | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | 0.981 |
| comEC | comGC | BSU25570 | BSU24710 | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | Pilin-like component of the DNA transport membrane platform; Required for transformation and DNA binding. Belongs to the ComGC family. | 0.976 |
| comEC | comGG | BSU25570 | BSU24670 | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | Component of the DNA transport platform; Required for transformation and DNA binding. | 0.903 |
| comGA | comEA | BSU24730 | BSU25590 | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | 0.996 |
| comGA | comEC | BSU24730 | BSU25570 | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | 0.990 |
| comGA | comGB | BSU24730 | BSU24720 | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | 0.999 |
| comGA | comGC | BSU24730 | BSU24710 | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | Pilin-like component of the DNA transport membrane platform; Required for transformation and DNA binding. Belongs to the ComGC family. | 0.999 |
| comGA | comGG | BSU24730 | BSU24670 | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | Component of the DNA transport platform; Required for transformation and DNA binding. | 0.990 |
| comGB | comEA | BSU24720 | BSU25590 | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | Membrane bound high-affinity DNA-binding receptor; Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect. | 0.987 |
| comGB | comEC | BSU24720 | BSU25570 | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | DNA channel for uptake in competent cells; The comE operon is required for the binding and uptake of transforming DNA. ComEC is required for internalization but is dispensable for DNA binding; To H.influenzae REC2, N.gonorrhoeae ComA and E.coli YcaI. | 0.981 |
| comGB | comGA | BSU24720 | BSU24730 | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | Membrane associated ATPase for DNA competence; Required for uptake of DNA by competent cells. | 0.999 |
| comGB | comGC | BSU24720 | BSU24710 | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | Pilin-like component of the DNA transport membrane platform; Required for transformation and DNA binding. Belongs to the ComGC family. | 0.999 |
| comGB | comGG | BSU24720 | BSU24670 | Membrane platform component of the DNA transport machinery; Required for transformation and DNA binding. Belongs to the GSP F family. | Component of the DNA transport platform; Required for transformation and DNA binding. | 0.990 |
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