STRINGSTRING
Abm4_0703 Abm4_0703 trpS trpS Abm4_0706 Abm4_0706 Abm4_0781 Abm4_0781 Abm4_0785 Abm4_0785 Abm4_0786 Abm4_0786
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Abm4_0703Iron-dependent repressor. (241 aa)
trpStryptophanyl-tRNA synthetase TrpS; Catalyzes the attachment of tryptophan to tRNA(Trp). (363 aa)
Abm4_0706Hypothetical protein. (239 aa)
Abm4_0781Hypothetical protein. (229 aa)
Abm4_0785PIN domain-containing protein. (622 aa)
Abm4_0786Xylose isomerase-like TIM barrel domain-containing protein. (249 aa)
Your Current Organism:
Methanobrevibacter sp. AbM4
NCBI taxonomy Id: 224719
Other names: M. sp. AbM4
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