STRINGSTRING
Abm4_1466 Abm4_1466 Abm4_1301 Abm4_1301 Abm4_1344 Abm4_1344 Abm4_1682 Abm4_1682 Abm4_0051 Abm4_0051 Abm4_0080 Abm4_0080 Abm4_0446 Abm4_0446 Abm4_0598 Abm4_0598 Abm4_0633 Abm4_0633 htpX htpX Abm4_0821 Abm4_0821 psmB psmB Abm4_0898 Abm4_0898 psmA psmA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Abm4_1466CAAX amino terminal protease family protein. (309 aa)
Abm4_1301CBS domain-containing protein. (134 aa)
Abm4_1344CAAX amino terminal protease family protein. (233 aa)
Abm4_1682Peptidase M50 family. (386 aa)
Abm4_0051Signal peptidase I. (140 aa)
Abm4_0080Universal archaeal protein Kae1; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. (549 aa)
Abm4_0446TauE family transporter. (240 aa)
Abm4_0598ATP-dependent protease S16 family; Belongs to the peptidase S16 family. (701 aa)
Abm4_0633TauE family transporter. (259 aa)
htpXPeptidase M48 family; Belongs to the peptidase M48B family. (321 aa)
Abm4_0821Type IV leader peptidase family protein. (279 aa)
psmBProteasome beta subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (208 aa)
Abm4_0898Signal peptidase I. (216 aa)
psmAProteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. (263 aa)
Your Current Organism:
Methanobrevibacter sp. AbM4
NCBI taxonomy Id: 224719
Other names: M. sp. AbM4
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