STRINGSTRING
Abm4_0187 Abm4_0187 Abm4_1200 Abm4_1200 fdhA2 fdhA2 Abm4_0480 Abm4_0480
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Abm4_0187ABC transporter substrate-binding protein. (538 aa)
Abm4_1200Adhesin-like protein. (600 aa)
fdhA2Formate dehydrogenase alpha subunit FdhA2. (343 aa)
Abm4_0480ABC transporter substrate-binding protein. (537 aa)
Your Current Organism:
Methanobrevibacter sp. AbM4
NCBI taxonomy Id: 224719
Other names: M. sp. AbM4
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