STRINGSTRING
Abm4_1560 Abm4_1560 Abm4_1472 Abm4_1472 Abm4_1380 Abm4_1380 Abm4_0716 Abm4_0716
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Abm4_1560pre-mRNA splicing ribonucleoprotein PRP31. (405 aa)
Abm4_1472RNA-binding protein. (199 aa)
Abm4_1380Hydrolase alpha/beta fold family. (322 aa)
Abm4_0716Hypothetical protein. (128 aa)
Your Current Organism:
Methanobrevibacter sp. AbM4
NCBI taxonomy Id: 224719
Other names: M. sp. AbM4
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