STRINGSTRING
Abm4_0187 Abm4_0187 Abm4_0480 Abm4_0480 Abm4_0569 Abm4_0569 mvhD2 mvhD2 btcC btcC mvhG mvhG mvhD mvhD frhG frhG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Abm4_0187ABC transporter substrate-binding protein. (538 aa)
Abm4_0480ABC transporter substrate-binding protein. (537 aa)
Abm4_0569Bile salt hydrolase. (325 aa)
mvhD2Methyl viologen-reducing hydrogenase delta subunit MvhD2. (129 aa)
btcCBicarbonate ABC transporter substrate-binding protein BtcC. (314 aa)
mvhGMethyl viologen-reducing hydrogenase gamma subunit MvhG. (309 aa)
mvhDMethyl viologen-reducing hydrogenase delta subunit MvhD. (139 aa)
frhGCoenzyme F420 hydrogenase gamma subunit FrhG. (271 aa)
Your Current Organism:
Methanobrevibacter sp. AbM4
NCBI taxonomy Id: 224719
Other names: M. sp. AbM4
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