5 items (Bradyrhizobium diazoefficiens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hmuR	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
	AND92066.1	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)
	hmuT	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	hmuU	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (363 aa)
	hmuV	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (268 aa)

Your Current Organism:

Bradyrhizobium diazoefficiens

NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND92066.1	hmuR	AAV28_33025	AAV28_33020	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
AND92066.1	hmuT	AAV28_33025	AAV28_33030	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
AND92066.1	hmuU	AAV28_33025	AAV28_33035	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.821
AND92066.1	hmuV	AAV28_33025	AAV28_33040	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.808
hmuR	AND92066.1	AAV28_33020	AAV28_33025	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
hmuR	hmuT	AAV28_33020	AAV28_33030	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
hmuR	hmuU	AAV28_33020	AAV28_33035	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.862
hmuR	hmuV	AAV28_33020	AAV28_33040	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.858
hmuT	AND92066.1	AAV28_33030	AAV28_33025	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
hmuT	hmuR	AAV28_33030	AAV28_33020	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
hmuT	hmuU	AAV28_33030	AAV28_33035	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.997
hmuT	hmuV	AAV28_33030	AAV28_33040	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.996
hmuU	AND92066.1	AAV28_33035	AAV28_33025	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.821
hmuU	hmuR	AAV28_33035	AAV28_33020	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
hmuU	hmuT	AAV28_33035	AAV28_33030	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
hmuU	hmuV	AAV28_33035	AAV28_33040	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	0.998
hmuV	AND92066.1	AAV28_33040	AAV28_33025	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
hmuV	hmuR	AAV28_33040	AAV28_33020	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
hmuV	hmuT	AAV28_33040	AAV28_33030	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
hmuV	hmuU	AAV28_33040	AAV28_33035	Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.998