68 items (Bradyrhizobium diazoefficiens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ptsN	Nitrogen regulatory protein; Seems to have a role in regulating nitrogen assimilation. (153 aa)
	ugpC	Glycerol-3-phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (361 aa)
	ugpE	Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa)
	AND86562.1	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	AND86821.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
	AND93730.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	ndvA	Cyclic beta-1,2-glucan ABC transporter; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). (602 aa)
	AND87163.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (616 aa)
	AND87559.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
	nodJ	Nodulation protein NodJ; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit encodes the transporter (By similarity). (262 aa)
	AND87706.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (630 aa)
	AND87794.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	AND87795.1	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
	AND87797.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
	AND87888.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	AND87940.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (358 aa)
	AND87941.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (361 aa)
	AND88160.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	AND88163.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
	AND88230.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
	kgtP	Alpha-ketoglutarate permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
	AND88634.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AND88635.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AND88643.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
	AND88656.1	Glycerol-3-phosphate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (335 aa)
	AND88798.1	Thiamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	AND93968.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
	AND88935.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (365 aa)
	AND88936.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (342 aa)
	AND88937.1	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
	ptsH	Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
	ptsI	Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (539 aa)
	AND89118.1	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
	AND89233.1	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (355 aa)
	AND89258.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
	AND89364.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	AND89435.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	AND89787.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)
	AND89832.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (366 aa)
	AND94147.1	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	AND90081.1	Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (371 aa)
	AND90113.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	AND90114.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
	AND90461.1	Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	AND90590.1	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
	AND94221.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AND90942.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	AND90944.1	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
	AND91044.1	3-phenylpropionic acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	AND91078.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
	AND91139.1	Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
	AND91415.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
	AND91417.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
	AND91508.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (493 aa)
	AND91523.1	Membrane protein; Mediates sucrose transmembrane transport down a concentration gradient. (86 aa)
	AND94332.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)
	AND91654.1	Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)
	AND92637.1	Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
	AND92756.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AND92758.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
	cit	Citrate-proton symporter; Is involved in the uptake of citrate and the transport of protons into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	AND92893.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)
	AND92983.1	PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
	ptsH-2	Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
	AND93207.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
	ptsP	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family. (755 aa)
	AND93411.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
	AND93533.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)

Your Current Organism:

Bradyrhizobium diazoefficiens

NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND86562.1	AND87888.1	AAV28_01010	AAV28_08800	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
AND86821.1	AND87794.1	AAV28_02480	AAV28_08225	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
AND86821.1	AND88160.1	AAV28_02480	AAV28_10375	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
AND86821.1	AND88634.1	AAV28_02480	AAV28_13035	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AND86821.1	AND89364.1	AAV28_02480	AAV28_17335	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
AND86821.1	AND90113.1	AAV28_02480	AAV28_21740	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
AND86821.1	AND90942.1	AAV28_02480	AAV28_26445	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AND86821.1	AND91417.1	AAV28_02480	AAV28_29195	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AND86821.1	AND92756.1	AAV28_02480	AAV28_37050	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
AND86821.1	AND93730.1	AAV28_02480	AAV28_02490	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AND87163.1	AND89118.1	AAV28_04485	AAV28_15955	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
AND87559.1	AND87797.1	AAV28_06865	AAV28_08240	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AND87559.1	AND89258.1	AAV28_06865	AAV28_16750	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AND87559.1	AND92893.1	AAV28_06865	AAV28_37890	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AND87559.1	AND93207.1	AAV28_06865	AAV28_39725	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
AND87706.1	AND89787.1	AAV28_07710	AAV28_19745	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
AND87706.1	AND94332.1	AAV28_07710	AAV28_30325	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
AND87794.1	AND86821.1	AAV28_08225	AAV28_02480	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
AND87794.1	AND87795.1	AAV28_08225	AAV28_08230	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-ribose transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
AND87794.1	AND88160.1	AAV28_08225	AAV28_10375	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969