85 items (Bradyrhizobium diazoefficiens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND88973.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
	AND88841.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
	AND93975.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	AND88824.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
	AND93966.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	AND88794.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
	AND88763.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	AND88725.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
	AND93944.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	AND88642.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
	AND88634.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AND88621.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	AND88439.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AND93917.1	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
	AND94562.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
	AND93300.1	Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
	AND93297.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
	AND93253.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AND93194.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (749 aa)
	AND94489.1	Leucine-binding protein (LBP); Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	AND92756.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AND92753.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	AND92738.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
	AND92720.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	AND92719.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	AND92718.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	AND94469.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
	AND94446.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	AND91899.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	AND91818.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
	AND91678.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AND91594.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
	AND91538.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	AND91510.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
	AND91509.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
	AND91482.1	Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	AND94312.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	AND91455.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
	AND94307.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (386 aa)
	AND91440.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
	AND91417.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
	AND91346.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
	AND91304.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
	AND91277.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
	AND91207.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
	AND91185.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
	AND91108.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	AND91097.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)
	AND90942.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
	AND90842.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
	AND90473.1	Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AND90400.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AND90113.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	AND89591.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	AND89364.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	AND89359.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	AND86411.1	Ethanolamine utilization protein EutM; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	AND86611.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
	AND93705.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	AND86632.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
	AND86677.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	AND86689.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	AND86707.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	AND86755.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AND86757.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	AND86763.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
	AND86818.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AND93730.1	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	AND86843.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	AND87110.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
	AND87569.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
	AND87570.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
	AND87780.1	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	AND87786.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	AND87788.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
	AND87794.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
	AND87817.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	AND88160.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
	AND88309.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
	AND89342.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (407 aa)
	AND89284.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
	AND89232.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	AND89145.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	AND89016.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	AND89010.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)

Your Current Organism:

Bradyrhizobium diazoefficiens

NCBI taxonomy Id: 224911
Other names: B. diazoefficiens USDA 110, Bradyrhizobium diazoefficiens USDA 110, Bradyrhizobium japonicum USDA 110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND86611.1	AND86689.1	AAV28_01285	AAV28_01740	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
AND86611.1	AND86843.1	AAV28_01285	AAV28_02615	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.441
AND86611.1	AND87780.1	AAV28_01285	AAV28_08145	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AND86611.1	AND88439.1	AAV28_01285	AAV28_11950	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
AND86611.1	AND92718.1	AAV28_01285	AAV28_36835	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AND86611.1	AND92719.1	AAV28_01285	AAV28_36840	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
AND86611.1	AND92720.1	AAV28_01285	AAV28_36845	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AND86611.1	AND94446.1	AAV28_01285	AAV28_35810	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
AND86632.1	AND93705.1	AAV28_01410	AAV28_01405	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.464
AND86632.1	AND93917.1	AAV28_01410	AAV28_11630	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AND86677.1	AND87110.1	AAV28_01675	AAV28_04185	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
AND86689.1	AND86611.1	AAV28_01740	AAV28_01285	Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421
AND86763.1	AND89010.1	AAV28_02140	AAV28_15320	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
AND86763.1	AND91346.1	AAV28_02140	AAV28_28735	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
AND86763.1	AND91510.1	AAV28_02140	AAV28_29785	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AND86763.1	AND91538.1	AAV28_02140	AAV28_29955	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AND86818.1	AND88642.1	AAV28_02465	AAV28_13075	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AND86818.1	AND88725.1	AAV28_02465	AAV28_13535	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
AND86818.1	AND89232.1	AAV28_02465	AAV28_16595	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AND86818.1	AND89284.1	AAV28_02465	AAV28_16890	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.632