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| | Nit | Nitrilase; Nitrilase that acts on various kinds of nitrile compounds such as aliphatic and aromatic nitriles. Has higher activity toward aliphatic nitriles compared to aromatic nitriles. Among the different substrates tested, has the highest activity toward hydrocinnamonitrile. Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. (321 aa) |
| | gshB | Glutathione synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa) |
| | hrcA | Heat-inducible transcription repressor; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (362 aa) |
| | grpE | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] (201 aa) |
| | dnaK | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (633 aa) |
| | dnaJ | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (377 aa) |
| | irr | Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (163 aa) |
| | katG | Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (721 aa) |
| | msrA | Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (218 aa) |
| | ndvA | Cyclic beta-1,2-glucan ABC transporter; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). (602 aa) |
| | cspA | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (70 aa) |
| | nodQ | NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate. (638 aa) |
| | cysD-2 | Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa) |
| | nolK | GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (335 aa) |
| | noeL | GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (361 aa) |
| | nodM | Glucosamine--fructose-6-phosphate aminotransferase; Involved in the production of the root hair deformation (HAD) factor specifically on soybean. (608 aa) |
| | hupH | Hydrogenase accessory protein HypB; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa) |
| | nifX | Nitrogen fixation protein NifX; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa) |
| | nifB | Nitrogen fixation protein NifB; Involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co or M-cluster) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing microorganisms. NifB catalyzes the crucial step of radical SAM-dependent carbide insertion that occurs concomitant with the insertion of a 9th sulfur and the rearrangement/coupling of two [4Fe-4S] clusters into a [8Fe-9S-C] cluster, the precursor to the M-cluster. (519 aa) |
| | nifZ | Nitrogen fixation protein NifZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa) |
| | nifH | Nitrogenase reductase; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (294 aa) |
| | nifQ | Molybdenum processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa) |
| | nifW | Nitrogenase stabilizing/protective protein; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. (113 aa) |
| | nodD2 | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). (330 aa) |
| | nodD1 | LysR family transcriptional regulator; NodD regulates the expression of the nodABCFE genes which encode other nodulation proteins. NodD is also a negative regulator of its own expression. Binds flavonoids as inducers (By similarity). (314 aa) |
| | nodA | Acyltransferase; N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts; Belongs to the NodA family. (210 aa) |
| | nodB | Chitooligosaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | nodC | N-acetylglucosaminyltransferase; May be involved in the synthesis of NodRm-1, a sulfated N- acyl-beta-1,4-tetrasaccharide of N-acetylglucosamine which initiates a series of events in the host plant species leading eventually to nodulation; Belongs to the NodC/HAS family. (485 aa) |
| | nodS | SAM-dependent methlyltransferase; SAM-utilizing methyltransferase involved in nod factor synthesis. (209 aa) |
| | nodU | Nodulation protein NodU; Involved in 6-O-carbamoylation of Nod-factors. (569 aa) |
| | nolO | Nodulation protein; Involved in 6-O-carbamoylation of Nod-factors. (548 aa) |
| | nodZ | Nodulation protein NodZ; Fucosyltransferase which adds the fucose moiety of the nod factor on its terminal reducing N-acetylglucosamine end. Uses GDP- fucose as the donor group. (328 aa) |
| | nifA | ATPase AAA; Required for activation of most nif operons, which are directly involved in nitrogen fixation. (605 aa) |
| | noeI | Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa) |
| | FixK | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | cspA-2 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa) |
| | copA | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa) |
| | AND87903.1 | Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa) |
| | dnaJ-2 | Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa) |
| | AND88201.1 | Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa) |
| | htrA | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa) |
| | fixK | Transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa) |
| | fixJ | Response regulator FixJ; FixJ, when activated by FixL, induces the expression of both nifA, required for activation of classical nif and fix genes, and fixK, required for FixN activation. (205 aa) |
| | fixN | Cytochrome C oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c or a quinol are transferred to the bimetallic center formed by a high-spin heme and copper B. (549 aa) |
| | AND88263.1 | Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa) |
| | AND88470.1 | Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa) |
| | tolC | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa) |
| | arsC | Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa) |
| | cspA-3 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa) |
| | AND88615.1 | Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (785 aa) |
| | AND88774.1 | Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (341 aa) |
| | FixK-2 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa) |
| | betB | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (494 aa) |
| | AND89115.1 | Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. (537 aa) |
| | cspA-4 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa) |
| | dnaJ-3 | Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa) |
| | gltA | Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (434 aa) |
| | hup | DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. (99 aa) |
| | lon | DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (807 aa) |
| | AND90176.1 | Multicopper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa) |
| | AND90271.1 | GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa) |
| | mscL | Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (138 aa) |
| | rpoH1 | RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (308 aa) |
| | arsB | Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa) |
| | tuf | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa) |
| | fusA | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. (690 aa) |
| | lpcC | Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa) |
| | fixK-2 | Nitrogen fixation protein FixK; B.japonicum has two FixLJ-dependent FixK homologs that are activators of the transcription of a group of genes involved in anaerobic processes such as denitrification and possibly nitrogen fixation. FixK may bind DNA at the FNR consensus binding site. (237 aa) |
| | clc | Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa) |
| | lon-2 | DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (796 aa) |
| | msrA-2 | Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (171 aa) |
| | AND94308.1 | Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa) |
| | AND91473.1 | Amidohydrolase; Nitrilase that mediates the hydrolysis of aromatic alpha- hydroxy nitriles to carboxylic acids. Has high activity toward mandelonitrile and mediates its hydrolysis to mandelic acid. Also mediates hydrolysis of mandelonitrile derivatives. Has weak activity toward aliphatic nitriles; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. (334 aa) |
| | tms2 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. (469 aa) |
| | AND91721.1 | Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa) |
| | hupJ | Hydrogenase formation protein HupJ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HupJ family. (169 aa) |
| | hupI | Rubredoxin; Could be an electron transport intermediate in hydrogen oxidation; Belongs to the rubredoxin family. (69 aa) |
| | hupH-2 | Hydrogenase accessory protein HypB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HupH/HyaF family. (287 aa) |
| | hupG | Hydrogenase accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HupG/HyaE family. (148 aa) |
| | hupA-2 | Uptake hydrogenase small subunit; This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. (363 aa) |
| | msrA-3 | Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (234 aa) |
| | cspA-5 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa) |
| | cspA-6 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa) |
| | exoT | UDP-hexose transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family. (268 aa) |
| | FixK-3 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (603 aa) |
| | cspA-7 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa) |
| | traG | Conjugal transfer protein TraG; Type IV secretion VirD4 coupling protein family; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa) |
| | cspA-8 | Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa) |
| | cisZ | Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (405 aa) |
| | cis | Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. (364 aa) |
| | dnaJ-4 | Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa) |
| | acdS | 1-aminocyclopropane-1-carboxylate deaminase; Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source; Belongs to the ACC deaminase/D-cysteine desulfhydrase family. (337 aa) |
| | bam | Amidase; Hydrolyzes indole-3-acetamide (IAM) into indole-3-acetic acid (IAA); Belongs to the amidase family. (524 aa) |
| | otsA | Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa) |
| | otsB | Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (273 aa) |
