Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AND90602.1 | AND91112.1 | AAV28_24510 | AAV28_27385 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| AND90602.1 | AND91126.1 | AAV28_24510 | AAV28_27470 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| AND90602.1 | AND92644.1 | AAV28_24510 | AAV28_36430 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | KpsF/GutQ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.647 |
| AND90602.1 | hldE | AAV28_24510 | AAV28_27175 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-beta-D-heptose 1-phosphate adenosyltransferase; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. | 0.981 |
| AND90602.1 | kdsA | AAV28_24510 | AAV28_21295 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family. | 0.602 |
| AND90602.1 | kdsB | AAV28_24510 | AAV28_04050 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.602 |
| AND90602.1 | kdtA | AAV28_24510 | AAV28_35250 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.603 |
| AND90602.1 | lpxA | AAV28_24510 | AAV28_21555 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.680 |
| AND90602.1 | lpxB | AAV28_24510 | AAV28_21545 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.606 |
| AND90602.1 | lpxC | AAV28_24510 | AAV28_30555 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.662 |
| AND90602.1 | lpxD | AAV28_24510 | AAV28_21570 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.588 |
| AND90602.1 | lpxK | AAV28_24510 | AAV28_35245 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.586 |
| AND90602.1 | msbB | AAV28_24510 | AAV28_16020 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.618 |
| AND90602.1 | rfaD | AAV28_24510 | AAV28_27180 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.813 |
| AND90602.1 | rfaF | AAV28_24510 | AAV28_27185 | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.856 |
| AND91112.1 | AND90602.1 | AAV28_27385 | AAV28_24510 | Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
| AND91112.1 | AND91126.1 | AAV28_27385 | AAV28_27470 | Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| AND91112.1 | rfaD | AAV28_27385 | AAV28_27180 | Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.401 |
| AND91126.1 | AND90602.1 | AAV28_27470 | AAV28_24510 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.964 |
| AND91126.1 | AND91112.1 | AAV28_27470 | AAV28_27385 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
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