Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AND86639.1 | AND87858.1 | AAV28_01455 | AAV28_08625 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.550 |
| AND86639.1 | AND92430.1 | AAV28_01455 | AAV28_35080 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
| AND86639.1 | AND92473.1 | AAV28_01455 | AAV28_35325 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AND86639.1 | AND93469.1 | AAV28_01455 | AAV28_41185 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.696 |
| AND86639.1 | AND93474.1 | AAV28_01455 | AAV28_41210 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| AND86639.1 | cheA | AAV28_01455 | AAV28_07825 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.983 |
| AND86639.1 | cheA-2 | AAV28_01455 | AAV28_08605 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
| AND86639.1 | cheB2 | AAV28_01455 | AAV28_07840 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. | 0.925 |
| AND86639.1 | cheB3 | AAV28_01455 | AAV28_08635 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. | 0.892 |
| AND86639.1 | cheR | AAV28_01455 | AAV28_07845 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.931 |
| AND86639.1 | cheR-2 | AAV28_01455 | AAV28_08630 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.916 |
| AND86639.1 | cheR1 | AAV28_01455 | AAV28_41195 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.931 |
| AND86639.1 | cheW | AAV28_01455 | AAV28_07830 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
| AND86639.1 | cheW-2 | AAV28_01455 | AAV28_08620 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.924 |
| AND86639.1 | cheW-3 | AAV28_01455 | AAV28_41205 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.954 |
| AND86639.1 | cheWII | AAV28_01455 | AAV28_08610 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.898 |
| AND86639.1 | cheY | AAV28_01455 | AAV28_07835 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
| AND86639.1 | cheY-2 | AAV28_01455 | AAV28_08600 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
| AND86639.1 | fliG | AAV28_01455 | AAV28_31980 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| AND86639.1 | fliG-2 | AAV28_01455 | AAV28_32605 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (By similarity). | 0.441 |
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