(58 nodes) Immunoglobulin like network (Lottia gigantea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V3Z0M8_LOTGI	Uncharacterized protein. (2003 aa)
	V3Z9G6_LOTGI	Ig-like domain-containing protein. (249 aa)
	V3ZEI1_LOTGI	Uncharacterized protein. (617 aa)
	V3ZKE2_LOTGI	Uncharacterized protein. (1136 aa)
	V3ZLQ6_LOTGI	Uncharacterized protein. (1337 aa)
	V3ZMI3_LOTGI	Uncharacterized protein. (383 aa)
	V3ZMT6_LOTGI	Uncharacterized protein. (303 aa)
	V3ZNE9_LOTGI	Uncharacterized protein. (404 aa)
	V3ZNL3_LOTGI	Ig-like domain-containing protein. (438 aa)
	V3ZQV6_LOTGI	Uncharacterized protein. (296 aa)
	V3ZUL7_LOTGI	Uncharacterized protein. (783 aa)
	V3ZUM7_LOTGI	Ig-like domain-containing protein. (212 aa)
	V4A054_LOTGI	Uncharacterized protein. (204 aa)
	V4A0Y2_LOTGI	Uncharacterized protein. (250 aa)
	V4A3F6_LOTGI	Uncharacterized protein. (315 aa)
	V4A7G0_LOTGI	Uncharacterized protein. (598 aa)
	V4A7I7_LOTGI	Uncharacterized protein. (529 aa)
	V4A9P4_LOTGI	Uncharacterized protein. (164 aa)
	V4AB23_LOTGI	Uncharacterized protein. (897 aa)
	V4ABA8_LOTGI	Uncharacterized protein. (588 aa)
	V4ABU9_LOTGI	Uncharacterized protein. (347 aa)
	V4AE81_LOTGI	Uncharacterized protein. (578 aa)
	V4AEM0_LOTGI	Uncharacterized protein. (1447 aa)
	V4AFS2_LOTGI	Uncharacterized protein. (907 aa)
	V4AFW1_LOTGI	Uncharacterized protein. (593 aa)
	V4AGG7_LOTGI	Uncharacterized protein. (1385 aa)
	V4AHV3_LOTGI	Uncharacterized protein. (589 aa)
	V4AJ77_LOTGI	Uncharacterized protein. (602 aa)
	V4AJB2_LOTGI	Uncharacterized protein. (856 aa)
	V4AJJ9_LOTGI	Uncharacterized protein. (751 aa)
	V4AK83_LOTGI	Uncharacterized protein. (526 aa)
	V4AKA7_LOTGI	Uncharacterized protein. (561 aa)
	V4AMJ1_LOTGI	Uncharacterized protein. (464 aa)
	V4AMV4_LOTGI	Ig-like domain-containing protein. (547 aa)
	V4ANI5_LOTGI	Ig-like domain-containing protein. (393 aa)
	V4AQL8_LOTGI	Uncharacterized protein. (562 aa)
	V4AR65_LOTGI	Uncharacterized protein. (204 aa)
	V4ARB0_LOTGI	Uncharacterized protein. (1306 aa)
	V4AT87_LOTGI	Uncharacterized protein. (822 aa)
	V4AV62_LOTGI	Uncharacterized protein. (294 aa)
	V4AWW5_LOTGI	Uncharacterized protein. (539 aa)
	V4AXJ6_LOTGI	Uncharacterized protein. (1357 aa)
	V4AXL9_LOTGI	Uncharacterized protein. (352 aa)
	V4AXZ7_LOTGI	Uncharacterized protein. (796 aa)
	V4B3T4_LOTGI	Uncharacterized protein. (539 aa)
	V4B4R7_LOTGI	Uncharacterized protein. (302 aa)
	V4B544_LOTGI	Ig-like domain-containing protein. (322 aa)
	V4B545_LOTGI	Uncharacterized protein. (703 aa)
	V4BF59_LOTGI	Uncharacterized protein. (223 aa)
	V4BIW8_LOTGI	Uncharacterized protein. (238 aa)
	V4BM83_LOTGI	Ig-like domain-containing protein. (361 aa)
	V4BNK5_LOTGI	Uncharacterized protein. (390 aa)
	V4BUE6_LOTGI	Ig-like domain-containing protein. (290 aa)
	V4BXH8_LOTGI	Uncharacterized protein. (401 aa)
	V4C147_LOTGI	Uncharacterized protein. (420 aa)
	V4C388_LOTGI	Uncharacterized protein. (430 aa)
	V4CDD7_LOTGI	Uncharacterized protein. (993 aa)
	V4CJW8_LOTGI	Uncharacterized protein. (1146 aa)

Your Current Organism:

Lottia gigantea

NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V3ZKE2_LOTGI	V4A9P4_LOTGI	V3ZKE2	V4A9P4	Uncharacterized protein.	Uncharacterized protein.	0.534
V3ZKE2_LOTGI	V4AEM0_LOTGI	V3ZKE2	V4AEM0	Uncharacterized protein.	Uncharacterized protein.	0.941
V4A9P4_LOTGI	V3ZKE2_LOTGI	V4A9P4	V3ZKE2	Uncharacterized protein.	Uncharacterized protein.	0.534
V4A9P4_LOTGI	V4AEM0_LOTGI	V4A9P4	V4AEM0	Uncharacterized protein.	Uncharacterized protein.	0.555
V4AEM0_LOTGI	V3ZKE2_LOTGI	V4AEM0	V3ZKE2	Uncharacterized protein.	Uncharacterized protein.	0.941
V4AEM0_LOTGI	V4A9P4_LOTGI	V4AEM0	V4A9P4	Uncharacterized protein.	Uncharacterized protein.	0.555
V4ARB0_LOTGI	V4AXZ7_LOTGI	V4ARB0	V4AXZ7	Uncharacterized protein.	Uncharacterized protein.	0.523
V4ARB0_LOTGI	V4BNK5_LOTGI	V4ARB0	V4BNK5	Uncharacterized protein.	Uncharacterized protein.	0.801
V4AXZ7_LOTGI	V4ARB0_LOTGI	V4AXZ7	V4ARB0	Uncharacterized protein.	Uncharacterized protein.	0.523
V4AXZ7_LOTGI	V4BNK5_LOTGI	V4AXZ7	V4BNK5	Uncharacterized protein.	Uncharacterized protein.	0.492
V4AXZ7_LOTGI	V4CJW8_LOTGI	V4AXZ7	V4CJW8	Uncharacterized protein.	Uncharacterized protein.	0.523
V4BNK5_LOTGI	V4ARB0_LOTGI	V4BNK5	V4ARB0	Uncharacterized protein.	Uncharacterized protein.	0.801
V4BNK5_LOTGI	V4AXZ7_LOTGI	V4BNK5	V4AXZ7	Uncharacterized protein.	Uncharacterized protein.	0.492
V4BNK5_LOTGI	V4CJW8_LOTGI	V4BNK5	V4CJW8	Uncharacterized protein.	Uncharacterized protein.	0.817
V4CJW8_LOTGI	V4AXZ7_LOTGI	V4CJW8	V4AXZ7	Uncharacterized protein.	Uncharacterized protein.	0.523
V4CJW8_LOTGI	V4BNK5_LOTGI	V4CJW8	V4BNK5	Uncharacterized protein.	Uncharacterized protein.	0.817