STRINGSTRING
Sps_05333 Sps_05333 Sps_05334 Sps_05334 Sps_05335 Sps_05335 Sps_05336 Sps_05336 Sps_05337 Sps_05337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_05333Putative amidohydrolase; PFAM: Carbon-nitrogen hydrolase. (245 aa)
Sps_05334TIGR02099 family protein; PFAM: AsmA-like C-terminal region; Protein of unknown function; TIGRFAM: TIGR02099 family protein. (1401 aa)
Sps_05335RNAse G; PFAM: Ribonuclease E/G family; S1 RNA binding domain; 'TIGRFAM: ribonuclease, Rne/Rng family'. (500 aa)
Sps_05336MAF protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (198 aa)
Sps_05337Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. (162 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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