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menF menF Sps_00758 Sps_00758 Sps_01594 Sps_01594 Sps_01691 Sps_01691 Sps_01692 Sps_01692 trpD trpD trpC trpC trpB trpB trpA trpA Sps_01769 Sps_01769 aroC aroC Sps_02414 Sps_02414 Sps_02419 Sps_02419 Sps_03366 Sps_03366 Sps_05071 Sps_05071 ubiC ubiC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
menFIsochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (452 aa)
Sps_00758Aminodeoxychorismate synthase, subunit I; 'PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region'; 'TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade'. (464 aa)
Sps_01594'PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain'. (400 aa)
Sps_01691'PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region'; 'TIGRFAM: anthranilate synthase component I, proteobacterial subset'. (529 aa)
Sps_01692Anthranilate synthase, component II; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. (213 aa)
trpDAnthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (349 aa)
trpCPFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate (PRA) isomerase; Belongs to the TrpC family. (491 aa)
trpBTryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (403 aa)
trpATryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (272 aa)
Sps_01769Salicylate synthase; PFAM: chorismate binding enzyme; TIGRFAM: salicylate synthase. (472 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (364 aa)
Sps_02414Chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase type II; DAHP synthetase I family; 'TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 1'. (660 aa)
Sps_02419Chorismate mutase; PFAM: Prephenate dehydrogenase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of T-protein. (379 aa)
Sps_03366PFAM: Chorismate lyase. (163 aa)
Sps_05071PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase. (193 aa)
ubiCChorismate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. (187 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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