STRINGSTRING
Sps_00003 Sps_00003 Sps_00008 Sps_00008 Sps_00326 Sps_00326 Sps_00502 Sps_00502 Sps_00619 Sps_00619 Sps_00620 Sps_00620 Sps_00621 Sps_00621 Sps_00896 Sps_00896 Sps_00897 Sps_00897 Sps_01058 Sps_01058 Sps_01075 Sps_01075 fur fur Sps_01734 Sps_01734 Sps_02051 Sps_02051 Sps_02847 Sps_02847 Sps_03069 Sps_03069 Sps_03217 Sps_03217 Sps_03219 Sps_03219 Sps_03222 Sps_03222 Sps_04048 Sps_04048 Sps_04292 Sps_04292 Sps_04293 Sps_04293 Sps_04294 Sps_04294 Sps_04385 Sps_04385 Sps_04611 Sps_04611 Sps_04929 Sps_04929 Sps_04930 Sps_04930 Sps_05099 Sps_05099 Sps_05281 Sps_05281 Sps_05472 Sps_05472
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00003Hypothetical protein. (185 aa)
Sps_00008Putative small integral membrane protein; PFAM: Prokaryotic Cytochrome C oxidase subunit IV; 'TIGRFAM: caa(3)-type oxidase, subunit IV'. (119 aa)
Sps_00326PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (502 aa)
Sps_00502Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family. (201 aa)
Sps_00619PFAM: SpoVR like protein. (509 aa)
Sps_00620PFAM: Protein of unknown function (DUF444); Belongs to the UPF0229 family. (422 aa)
Sps_00621PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain. (644 aa)
Sps_00896Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (160 aa)
Sps_00897Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa)
Sps_01058Hypothetical protein; PFAM: Subunit 17 of Mediator complex; META domain; Type III secretion system lipoprotein chaperone (YscW). (284 aa)
Sps_01075PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase. (317 aa)
furPFAM: Ferric uptake regulator family; Belongs to the Fur family. (143 aa)
Sps_01734Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. (330 aa)
Sps_02051Hypothetical protein; PFAM: Type III secretion system lipoprotein chaperone (YscW). (133 aa)
Sps_02847PFAM: Catalase; Catalase-related immune-responsive; Belongs to the catalase family. (488 aa)
Sps_03069PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family. (108 aa)
Sps_03217Putative intracellular protease/amidase; PFAM: N-terminal domain of DJ-1_PfpI family; DJ-1/PfpI family. (226 aa)
Sps_03219'PFAM: Bacterial regulatory proteins, tetR family'. (200 aa)
Sps_03222Acyl dehydratase; PFAM: MaoC like domain. (134 aa)
Sps_04048Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein. (147 aa)
Sps_04292Hypothetical protein. (68 aa)
Sps_04293Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (155 aa)
Sps_04294Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (156 aa)
Sps_04385DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family. (155 aa)
Sps_04611Transcriptional regulator; PFAM: HTH domain. (213 aa)
Sps_04929Alkyl hydroperoxide reductase subunit F; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain; TIGRFAM: alkyl hydroperoxide reductase subunit F. (525 aa)
Sps_04930Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (189 aa)
Sps_05099Bacterioferritin-associated ferredoxin; PFAM: BFD-like [2Fe-2S] binding domain. (63 aa)
Sps_05281PFAM: PhoH-like protein; PIN domain. (464 aa)
Sps_05472Ferritin-like protein; Iron-storage protein. (175 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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