STRINGSTRING
Sps_00050 Sps_00050 Sps_00129 Sps_00129 Sps_00241 Sps_00241 Sps_00284 Sps_00284 Sps_00285 Sps_00285 Sps_00286 Sps_00286 Sps_00287 Sps_00287 Sps_00288 Sps_00288 Sps_00418 Sps_00418 Sps_00464 Sps_00464 Sps_00481 Sps_00481 Sps_00542 Sps_00542 Sps_00760 Sps_00760 Sps_00799 Sps_00799 Sps_00882 Sps_00882 dtpB dtpB Sps_00957 Sps_00957 Sps_01127 Sps_01127 Sps_01157 Sps_01157 Sps_01191 Sps_01191 Sps_01291 Sps_01291 Sps_01544 Sps_01544 Sps_01545 Sps_01545 Sps_01546 Sps_01546 Sps_01547 Sps_01547 Sps_01548 Sps_01548 Sps_01549 Sps_01549 Sps_01550 Sps_01550 Sps_01600 Sps_01600 Sps_01640 Sps_01640 Sps_01698 Sps_01698 Sps_01699 Sps_01699 Sps_01846 Sps_01846 Sps_01847 Sps_01847 Sps_01848 Sps_01848 Sps_01849 Sps_01849 Sps_01850 Sps_01850 Sps_01851 Sps_01851 Sps_01896 Sps_01896 Sps_01897 Sps_01897 Sps_01994 Sps_01994 Sps_02099 Sps_02099 Sps_02100 Sps_02100 Sps_02191 Sps_02191 Sps_02198 Sps_02198 Sps_02202 Sps_02202 Sps_02216 Sps_02216 Sps_02234 Sps_02234 Sps_02249 Sps_02249 Sps_02346 Sps_02346 Sps_02361 Sps_02361 Sps_02391 Sps_02391 Sps_02514 Sps_02514 Sps_02521 Sps_02521 Sps_02522 Sps_02522 Sps_02812 Sps_02812 Sps_02844 Sps_02844 Sps_02938 Sps_02938 Sps_03065 Sps_03065 Sps_03170 Sps_03170 Sps_03205 Sps_03205 Sps_03246 Sps_03246 Sps_03295 Sps_03295 Sps_03305 Sps_03305 Sps_03382 Sps_03382 Sps_03522 Sps_03522 Sps_03561 Sps_03561 Sps_03706 Sps_03706 Sps_03751 Sps_03751 Sps_03897 Sps_03897 Sps_04044 Sps_04044 Sps_04045 Sps_04045 Sps_04046 Sps_04046 Sps_04047 Sps_04047 Sps_04056 Sps_04056 Sps_04128 Sps_04128 Sps_04144 Sps_04144 Sps_04339 Sps_04339 Sps_04340 Sps_04340 Sps_04416 Sps_04416 Sps_04446 Sps_04446 Sps_04487 Sps_04487 Sps_04488 Sps_04488 Sps_04569 Sps_04569 Sps_04570 Sps_04570 Sps_04571 Sps_04571 Sps_04575 Sps_04575 Sps_04608 Sps_04608 Sps_04631 Sps_04631 Sps_04781 Sps_04781 Sps_04788 Sps_04788 Sps_04789 Sps_04789 Sps_04866 Sps_04866 Sps_04896 Sps_04896 Sps_04897 Sps_04897 Sps_04898 Sps_04898 Sps_04899 Sps_04899 Sps_04900 Sps_04900 Sps_04901 Sps_04901 Sps_04902 Sps_04902 Sps_04903 Sps_04903 hmuV hmuV Sps_04910 Sps_04910 Sps_04947 Sps_04947 Sps_04962 Sps_04962 Sps_05031 Sps_05031 Sps_05032 Sps_05032 Sps_05033 Sps_05033 Sps_05070 Sps_05070 Sps_05175 Sps_05175 Sps_05218 Sps_05218 Sps_05219 Sps_05219 Sps_05220 Sps_05220 Sps_05248 Sps_05248 Sps_05279 Sps_05279 Sps_05301 Sps_05301 Sps_05373 Sps_05373 Sps_05462 Sps_05462 Sps_05465 Sps_05465 Sps_05487 Sps_05487 Sps_05541 Sps_05541 Sps_05655 Sps_05655
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sps_00050Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase; WD40-like Beta Propeller Repeat; Amidohydrolase family. (1081 aa)
Sps_00129PFAM: Bacterial protein of unknown function (DUF885). (603 aa)
Sps_00241PFAM: Zinc carboxypeptidase. (848 aa)
Sps_00284PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (722 aa)
Sps_00285'TIGRFAM: siderophore ferric iron reductase, AHA_1954 family'. (238 aa)
Sps_00286ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter. (255 aa)
Sps_00287ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein. (332 aa)
Sps_00288ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (667 aa)
Sps_00418PFAM: 2OG-Fe(II) oxygenase superfamily. (231 aa)
Sps_00464PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (700 aa)
Sps_00481Putative aminopeptidase; PFAM: PA domain; Peptidase family M28. (564 aa)
Sps_00542PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (698 aa)
Sps_00760Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat. (683 aa)
Sps_00799PFAM: Bacterial protein of unknown function (DUF885). (589 aa)
Sps_00882Aminopeptidase N; PFAM: Peptidase family M1; ERAP1-like C-terminal domain. (859 aa)
dtpBAmino acid/peptide transporter (peptide:H symporter); Proton-dependent permease that transports di- and tripeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily. (508 aa)
Sps_00957Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; Carboxypeptidase regulatory-like domain. (753 aa)
Sps_01127PFAM: Angiotensin-converting enzyme. (612 aa)
Sps_01157Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (863 aa)
Sps_01191PFAM: Major Facilitator Superfamily. (573 aa)
Sps_01291PFAM: Methyltransferase domain. (276 aa)
Sps_01544PFAM: Protein of unknown function (DUF1566). (189 aa)
Sps_01545PFAM: Protein of unknown function (DUF1566). (475 aa)
Sps_01546PFAM: Proprotein convertase P-domain. (817 aa)
Sps_01547Hypothetical protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (731 aa)
Sps_01548Hypothetical protein. (175 aa)
Sps_01549PFAM: Uncharacterized conserved protein (DUF2149). (119 aa)
Sps_01550Mg chelatase, cobalamin biosynthesis protein CobN; PFAM: CobN/Magnesium Chelatase. (1319 aa)
Sps_01600Peptidyl-dipeptidase Dcp; PFAM: Peptidase family M3. (712 aa)
Sps_01640Putative aminopeptidase; PFAM: PA domain; Peptidase family M28. (535 aa)
Sps_01698Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family. (689 aa)
Sps_01699Hypothetical protein. (121 aa)
Sps_01846Hypothetical protein. (419 aa)
Sps_01847Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (206 aa)
Sps_01848PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1. (134 aa)
Sps_01849Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1. (174 aa)
Sps_01850Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1. (451 aa)
Sps_01851PFAM: Protein of unknown function (DUF3450). (260 aa)
Sps_01896Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (763 aa)
Sps_01897Fe2+ transport system protein A; PFAM: FeoA domain. (89 aa)
Sps_01994Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (715 aa)
Sps_02099Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase; Amidohydrolase family. (1027 aa)
Sps_02100Amidohydrolase, imidazolonepropionase; PFAM: Amidohydrolase. (454 aa)
Sps_02191Outer membrane receptor for ferrienterochelin and colicins; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (848 aa)
Sps_02198PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (948 aa)
Sps_02202Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (820 aa)
Sps_02216'PFAM: Leukotriene A4 hydrolase, C-terminal; Peptidase family M1'. (594 aa)
Sps_02234Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family. (934 aa)
Sps_02249TonB family protein; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain. (393 aa)
Sps_02346PFAM: Bacterial protein of unknown function (DUF885). (614 aa)
Sps_02361Hypothetical protein. (378 aa)
Sps_02391Putative aminopeptidase; PFAM: PA domain; Peptidase family M28. (467 aa)
Sps_02514PFAM: POT family; 'TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial'. (544 aa)
Sps_02521PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (920 aa)
Sps_02522PFAM: Prolyl oligopeptidase family. (823 aa)
Sps_02812Hypothetical protein. (748 aa)
Sps_02844Dipeptidyl-peptidase 7; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (718 aa)
Sps_02938PFAM: Peptidase family M28. (352 aa)
Sps_03065PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (896 aa)
Sps_03170Dipeptidyl aminopeptidase/acylaminoacyl peptidase; 'PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family'. (657 aa)
Sps_03205Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family. (688 aa)
Sps_03246Hypothetical protein. (196 aa)
Sps_03295Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (800 aa)
Sps_03305Dipeptidyl aminopeptidase/acylaminoacyl peptidase; PFAM: Prolyl oligopeptidase family. (654 aa)
Sps_03382'PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24'. (438 aa)
Sps_03522Hypothetical protein. (175 aa)
Sps_03561PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (896 aa)
Sps_03706Hypothetical protein; 'PFAM: Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella; ASPIC and UnbV'. (1072 aa)
Sps_03751PFAM: POT family; 'TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial'. (492 aa)
Sps_03897Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (771 aa)
Sps_04044Hypothetical protein. (105 aa)
Sps_04045Putative iron-regulated membrane protein; PFAM: PepSY-associated TM helix. (552 aa)
Sps_04046PFAM: Protein of unknown function (DUF3325). (121 aa)
Sps_04047Hypothetical protein. (166 aa)
Sps_04056Tol biopolymer transport system, periplasmic component-related protein; Degrades oligopeptides; Belongs to the peptidase S41B family. (1094 aa)
Sps_04128PFAM: TonB-dependent Receptor Plug Domain; Domain of unknown function (DUF4480); Outer membrane protein beta-barrel family; TIGRFAM: TonB-dependent receptor. (929 aa)
Sps_04144PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (697 aa)
Sps_04339PFAM: Trypsin. (337 aa)
Sps_04340Hypothetical protein. (316 aa)
Sps_04416PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (847 aa)
Sps_04446Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (758 aa)
Sps_04487Hypothetical protein; PFAM: Amidohydrolase family. (70 aa)
Sps_04488Hypothetical protein; PFAM: Amidohydrolase. (114 aa)
Sps_04569ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain. (342 aa)
Sps_04570ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (543 aa)
Sps_04571ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (335 aa)
Sps_04575Phosphoglycerate mutase family protein; PFAM: Histidine phosphatase superfamily (branch 1). (168 aa)
Sps_04608Dipeptide/tripeptide permease; PFAM: Major Facilitator Superfamily. (510 aa)
Sps_04631PFAM: Gram-negative bacterial TonB protein C-terminal. (58 aa)
Sps_04781ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein. (274 aa)
Sps_04788ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (385 aa)
Sps_04789ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter. (308 aa)
Sps_04866PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (858 aa)
Sps_04896Heme utilization protein HutZ; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: heme utilization protein HutZ. (199 aa)
Sps_04897Heme utilization protein HuvX; PFAM: Haem utilisation ChuX/HutX; TIGRFAM: putative heme utilization carrier protein HutX. (176 aa)
Sps_04898Hypothetical protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (676 aa)
Sps_04899Outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial TonB protein C-terminal; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1. (253 aa)
Sps_04900Outer membrane transport energization protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1. (264 aa)
Sps_04901PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1. (138 aa)
Sps_04902ABC-type hemin transport system, periplasmic component; PFAM: Periplasmic binding protein. (317 aa)
Sps_04903ABC-type Fe3+-siderophore transport system, permease component; PFAM: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa)
hmuVABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (254 aa)
Sps_04910PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (715 aa)
Sps_04947Dipeptidyl-peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region. (755 aa)
Sps_04962Outer membrane receptor for Fe3+-dicitrate; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (732 aa)
Sps_05031Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (965 aa)
Sps_05032PFAM: FecR protein. (359 aa)
Sps_05033'PFAM: Sigma-70, region 4; Sigma-70 region 2'; 'TIGRFAM: RNA polymerase sigma factor, sigma-70 family'; Belongs to the sigma-70 factor family. ECF subfamily. (205 aa)
Sps_05070PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region. (829 aa)
Sps_05175Dipeptidyl-peptidase 7; PFAM: Peptidase S46. (740 aa)
Sps_05218Hypothetical protein; PFAM: S-adenosyl-L-methionine-dependent methyltransferase. (227 aa)
Sps_05219PFAM: Bacterial protein of unknown function (DUF885). (632 aa)
Sps_05220rarD protein; PFAM: EamA-like transporter family; Multidrug resistance efflux transporter; TIGRFAM: rarD protein. (320 aa)
Sps_05248PFAM: Fibronectin type III domain; Peptidase family M28. (474 aa)
Sps_05279Hypothetical protein. (801 aa)
Sps_05301Hypothetical protein; PFAM: TraB family. (293 aa)
Sps_05373Endothelin-converting enzyme; PFAM: Peptidase family M13. (683 aa)
Sps_05462PFAM: Zinc carboxypeptidase. (615 aa)
Sps_05465PFAM: Domain of unknown function (DUF4098). (251 aa)
Sps_05487Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (718 aa)
Sps_05541PFAM: Domain of unknown function (DUF4440); TIGRFAM: conserved hypothetical protein. (140 aa)
Sps_05655Outer membrane receptor for monomeric catechols; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor. (718 aa)
Your Current Organism:
Shewanella psychrophila
NCBI taxonomy Id: 225848
Other names: CGMCC 1.6159, JCM 13876, S. psychrophila, Shewanella psychrophila Xiao et al. 2007 emend. Thorell et al. 2019, Shewanella sp. WP2, strain WP2
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